Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01340 ATGGCGGAAGCCTTAAGCTCAAGCCCAACGATGGCCCACAGAAAGAGGGTTCCCATGTCCGCTCGTATGCAGTCTCCCACGAGTGCCTTCTTCGTGGGCTCCAACGACGACCAGCTCGAACGGGCCCAGGCTCGTGCAGCCCGCGCCGCTGCCATCCGCCACCACAAGTCCCTTGCCGTCAACTTCCATTCGCACCCTCCCAAGTCTCTTCCATGTCTCAACAAGCACCATATTCTCGAGTTGTTCCACAACTACATAAAGCTCGCTTCCGAAAATAAAATCAATCAGAAAAACACCTGGGAGTTGGATTTGATCGATCATCTCACCGATATTATTAGGGTTGAAGAAGGGAATCAAGTGGAGACTAATTTTCAAATAGCAAGCTGTACTCTTGAAGCTGGAGTCAGAATATACTCCTTAAGGGTGGATTCGGTGCATTCGGATGCATATAAAGTCCTTGCTGGAATGAATAGAGTAGGCCAAGATACTGAGGAAGACGCTACTTTAGGGAGTGTTAATGCTGAAAAGGGACAGGCAAGCAGGAAGGAAGTTGACAAAAAGTTGTCGCTTTTGTCAACATTGGAATCTTCTTTTGAGGTTCTTAATGTAAAGAAGTTTGACGTTGCATTTGCAGTGGATCCACTCTATCACCAGACATCAGCAAAATTTGATGAAGGTGGAGCCAAAGGCCTTTTGATGAATAATCTTGGTGTATATGGTAAATGTAGGGTGCTCTTTGATTCACTTGAAGTGCCAGCGAAGTGCATAACCAGTCAAAATGATCATGATATTTCAGATACAATTGATCTTTCTTTCGCCAGAGATTGTGTTGAACAGATGATACTGAATCTGCATACGAAAGATATAATCTCTCCAACTCTCCGGATGATAGTAAATCAATTTGATGAAAATAATAGAAGGCCTTTTGATTTTCAATCTTCTGGCGAGAAATCAGCTGAAGAGTTTGATGCAGCTATTGATTGTAAAGTTGTCAATGGAAAAGAAGGATATGAGAACTGCTCCTCTTGGAGTTATGAACACGATACCCAAACATTTGCTGCTGAAGGGGGCTTTAGTGACGCAGACCCTAGTTTTCCAAGTTACCATGAGGAAAAAGAACCTTTTAATTCCCAAGACCCTGATATGGATGACATATTTGACAATGTTGATGGATGTTTATTTTTGAGTCTGGGTTTTAGGTCAAAGAAAAATTCATCGGCAGGTCCTGCTCATTGGAAATATCAAAAAATTCAAGGCTCAAAGTCAAAGGTTCATTGTACTTATTGTACTTCCGAGGATGAGTTGATGATCCAGAAAACCAGGCAGCCAAGGACAAAGAGACAGGTCGAAGTTGATTTAGAATTCACAAGTTTTCTGGATAAAAAAATACCTGATATTTTTTCTCCTCCCAAGAATCCCAAACCATTACTGCTCCCAGAAAATATATCACCTTGCGTTTCAAAACTTCCAGAGGACTGGCACTACGAACCAGAGGATCTTGTCAAGTTATTTCTTTTGCCTTATGTAAAGTGTATTGGGAGGAGAGCGAGAATGGTACCAGATGTCTCAGAAGAACAATGCTATAATAACGAATCATTCCCTTCCTGGGATAATGGAAGTGTTTGTGATGATGTCACTGATGTACATAATGACATGGATGACTCTAGCACACTTATTTCTCTGCCTCGTCAAATCAATAAAATTGAAGTCCAGTATGACAAAACATCCAAACAAGTCAATGTGCAGGCTCTGAAAATAACACTTTGGGACCATATTCAAGAATTTATTCAACTTCCGTTTCAGGGTCAGAAAGAAATGGTATCTTTCAGGCATATATTGACAAACTTTCCAAGTAAATGCAATGCTGCTGCAAATATTAGTGACATATCTCCACATCTGTGTTTCATATGCCTATTACATTTGGCTAATGAGAAGGGGATGAGCATCCAAAGTTGCCCCAACTTGGATGATCTTGGCATATGCTTACTTGATGGTGCCACTAACACCAGAACAGTTTAG 2019 0.4146 MAEALSSSPTMAHRKRVPMSARMQSPTSAFFVGSNDDQLERAQARAARAAAIRHHKSLAVNFHSHPPKSLPCLNKHHILELFHNYIKLASENKINQKNTWELDLIDHLTDIIRVEEGNQVETNFQIASCTLEAGVRIYSLRVDSVHSDAYKVLAGMNRVGQDTEEDATLGSVNAEKGQASRKEVDKKLSLLSTLESSFEVLNVKKFDVAFAVDPLYHQTSAKFDEGGAKGLLMNNLGVYGKCRVLFDSLEVPAKCITSQNDHDISDTIDLSFARDCVEQMILNLHTKDIISPTLRMIVNQFDENNRRPFDFQSSGEKSAEEFDAAIDCKVVNGKEGYENCSSWSYEHDTQTFAAEGGFSDADPSFPSYHEEKEPFNSQDPDMDDIFDNVDGCLFLSLGFRSKKNSSAGPAHWKYQKIQGSKSKVHCTYCTSEDELMIQKTRQPRTKRQVEVDLEFTSFLDKKIPDIFSPPKNPKPLLLPENISPCVSKLPEDWHYEPEDLVKLFLLPYVKCIGRRARMVPDVSEEQCYNNESFPSWDNGSVCDDVTDVHNDMDDSSTLISLPRQINKIEVQYDKTSKQVNVQALKITLWDHIQEFIQLPFQGQKEMVSFRHILTNFPSKCNAAANISDISPHLCFICLLHLANEKGMSIQSCPNLDDLGICLLDGATNTRTV 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01340 672 PIRSF Condensin_H 538 664 IPR022816 GO:0000796|GO:0007076
Phco10g01340 672 PIRSF Condensin_H 263 557 IPR022816 GO:0000796|GO:0007076
Phco10g01340 672 PIRSF Condensin_H 4 275 IPR022816 GO:0000796|GO:0007076
Phco10g01340 672 PANTHER CONDENSIN COMPLEX SUBUNIT 2 14 664 IPR022816 GO:0000796|GO:0007076
Phco10g01340 672 MobiDBLite consensus disorder prediction 1 20 - -
Phco10g01340 672 Pfam Condensin complex subunit 2 24 521 IPR022816 GO:0000796|GO:0007076
Phco10g01340 672 Pfam Condensin complex subunit 2 548 660 IPR022816 GO:0000796|GO:0007076
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01340 Phco-Chr10 35897721 35901556 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01340 10 35897721 35901556 Phco10g01340 10 35897721 35901556 ECH
Phco10g01340 10 35897721 35901556 Phco9g01120 9 10321729 10325941 PCT