Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01096 ATGGGGTTTTTGCTCAGAGAGGTTTTGAGGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCGTGTTTTGGAAGATCGGTTGCAACAATTCCAAGCTGTTAATCTGGGAAGATCACTACTATGAACCCTTGCCATCTCCTTTCCCTCCACGAACTGTTGGGATGTCTAATTTTCCATACCGAGACGGGGAAGGGTGCTGGTTTTCTTCTGAGTCTCAACTGGGGATTCAGGAGGAGGACAGAGTCGGTGGATTGATTAAAAAAATGATAGTGAATAATTCCGTCAGTATTGCTGGAGAAGGGATCGTTGGACGGGCAACATTTACAGGAAACTATCAGTGGATTCTTATGAACAATTTTAGTAGAGATGCGTATCCACCAGAGGTATATCCTGAGTTGCATTACCAATTTTCTGCTGGAATGCAGACAGTAGCAGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAATTTGGTTCTTTATTGCCAATAATGGAAGATATTGGATTTGTGAATGATGTGAAGAACTTGATCTTCCAATTGGGATGTGTACCTGCTGCACTTCTTTCTGAAGACTATTCAGCGAAAAATTCTAATGAAAGACTTGGTGTACCCGTCACTGTTGATCCACCTGTCGTTACTTCTAACTGCACTCCCTGTGCAGCTAATGGCTCCAACCAACTAACTAATTCTACTCTTGCTTCAAGGCCTGTTGCTCCATTACCTCATCCGCCAAGGGGAGAAATAGATAATTACCAGGATTCTGTATTGACACCTCAAACCTATGACCCAAACCAAATATTTGATAGCATTTGCCAACCAAAGGCTCATTCAATGATAAAAATAAATGCCCATGGCCAACCGAAGAAGACAGTCGTCCAGGCTGAAGCTAAAGTGATACCTGCAAATTTGGATTCATGTATGCAACAACATTCTTCTTATAATGCCAGATCTGCATTCAATGAATTAGCTGGCTTCAATCAATCAAATCTTAGTTGCAGCCTTAACTATATGGAACAACAAACATCAGGTGTTGGAAGACAGAGTCACGTTAATCCCAACATGAATCCATCAAGTGCCTCAAATATGCCTCAACTGAGAACAGGTGGAGGCAAAATTCTTGGGCAGAATCTGAGTTCTGGTAGCAGTTCACTATTTGGAGGAATCCCAATATGTGGTGGGAGTAATCTTTTGAGAACAAATATGATTAACTGCTCTGTTTCAAATTCTCACAAAGTACCCACTTCTGAATTTTCTGGAACTCACAAGATTGGGTTTGGACTTCAAAATAACAATTCAACAACTGATGCTGGGCTCTGTTCTGTGCCTAATCTCTGTAATCAATCAGTTACCAGTCACACGAATCTAGAAAACTCTGCTCAGAACCTTCCCATTGATTTAAAGCATGCTTGTGATGCTTTCGTTTCAACTGATCAAAGGATACATGACGATTTGCTTCATGCCGCTCTTAAGATTCCATCTCTTCATCTTAATAAGCATGAGCCTATGGGTGATTGTATCCCTGGTTTTGTTCAAGATAGCCTCAATAAAGATGTTACTAGTCAAAATATGGCGAAAAGGAATGTTAAACATGAAGAGACCTATACTCAACTTCCATCAGGGGATGATCTCTTTGATGTTTTAGGTGTAGATTTGAAAAGGCAACTACTCAATGGAAACTGGGATAAGTTGCTTGCCACTGATTCAGAGGCCAACAGAGAGCGTCTAGATAAAAAGGCAGCATGCATGAATTTGGAAGGTGTATGTCCTGATAATAGCTATTCAGTTAAAGATGCAATATCAGACAGTGGCATCTTCTCTGGAGCGGGCTCTGACCACCTCTTAGATGCTGTAGTTTCAAAAGCTCAATCGGCCCCAAAACAGAGTTCTGATGAAATGTCTTGCAGGACAACACTGACAAGGGTTAGCACGGCCTCCGTTTCCTCTCCTGCCTGCAAGCAGGTTCCGTCTGATCATGTGCTGAAGGGATTGTTTGATTTTCCCAAGAATGGGGCTAAAAGAGCTGCTGGGGAAACAAGTTCTCCTAGGTCTGGGTGCAGCAAGGATGATGCTGGAAACTGTTCTCAAATGACTTCCATATATGGTTCTAAGCTTAGTTCGTGGGTTGAGAATGGAAGTAGTGTGAAACGTGAAAGCAGCGTTTCAACTGGATACTCTAAGAGACCAGAAGAAGTTTGCAAATCAAATAGGAAAAGACTTAAACCTGGAGAGAATCCTAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTTAAAGAATTAAGGGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGGACTTCTGGAGAAGACCATCAAGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAGACTGGGGAATCTAAGATTGTTAGTAAAGAAGGTGGATTGCTATTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCGTATGAGGTTGGCTCGCAATCAATGGTTTGTCCAATCATTGTTGAGGATCTTAATCCACCTCGTCAGATGCTAGTAGAGATGCTCTGTGAGGAGCGTGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGTTTAACCATCTTGAAGGGAGTTATGGAAGCTCGTAATGACAAGATCTGGGCACGCTTTGCAGTTGAGGCAAACAGGGATGTGACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGATCAAACAGTGAAGGGTGGTGCATCATCTTCATCAAATGCAGCTGATAACAACATGATGGTGTATCATTCTTTCCCACAAGCTACCCAGATACCAGCAACTGGTAGGCCTAGTAGTTTGCAATGA 2862 0.4224 MGFLLREVLRTLCSRNRWSYAVFWKIGCNNSKLLIWEDHYYEPLPSPFPPRTVGMSNFPYRDGEGCWFSSESQLGIQEEDRVGGLIKKMIVNNSVSIAGEGIVGRATFTGNYQWILMNNFSRDAYPPEVYPELHYQFSAGMQTVAVIPVLPHGVVQFGSLLPIMEDIGFVNDVKNLIFQLGCVPAALLSEDYSAKNSNERLGVPVTVDPPVVTSNCTPCAANGSNQLTNSTLASRPVAPLPHPPRGEIDNYQDSVLTPQTYDPNQIFDSICQPKAHSMIKINAHGQPKKTVVQAEAKVIPANLDSCMQQHSSYNARSAFNELAGFNQSNLSCSLNYMEQQTSGVGRQSHVNPNMNPSSASNMPQLRTGGGKILGQNLSSGSSSLFGGIPICGGSNLLRTNMINCSVSNSHKVPTSEFSGTHKIGFGLQNNNSTTDAGLCSVPNLCNQSVTSHTNLENSAQNLPIDLKHACDAFVSTDQRIHDDLLHAALKIPSLHLNKHEPMGDCIPGFVQDSLNKDVTSQNMAKRNVKHEETYTQLPSGDDLFDVLGVDLKRQLLNGNWDKLLATDSEANRERLDKKAACMNLEGVCPDNSYSVKDAISDSGIFSGAGSDHLLDAVVSKAQSAPKQSSDEMSCRTTLTRVSTASVSSPACKQVPSDHVLKGLFDFPKNGAKRAAGETSSPRSGCSKDDAGNCSQMTSIYGSKLSSWVENGSSVKRESSVSTGYSKRPEEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDGLLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGASSSSNAADNNMMVYHSFPQATQIPATGRPSSLQ 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01096 953 MobiDBLite consensus disorder prediction 671 690 - -
Phco9g01096 953 MobiDBLite consensus disorder prediction 729 754 - -
Phco9g01096 953 CDD bHLH_AtLHW_like 743 812 - -
Phco9g01096 953 MobiDBLite consensus disorder prediction 711 725 - -
Phco9g01096 953 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 947 IPR043561 GO:0003700|GO:0006355
Phco9g01096 953 MobiDBLite consensus disorder prediction 711 754 - -
Phco9g01096 953 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Phco9g01096 953 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 739 788 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01096 Phco-Chr9 9791781 9797233 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01366 10 36261026 36267065 Phco9g01096 9 9791781 9797233 PCT