Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01366 ATGGGGTTTTTGTTGAAAGAAGCTTTGAGGACTCTCTGCGGTCGGAATCAATGGTCTTATGCTGTGTTCTGGAAGATCGGTTGCCACAATTCCAAGCTGTTAATCTGGGAAGAATGCTACTATGAACCTTTGCCATGCCCTCCACCCATGTTTGGGATAGGAGATCTGCCTTACCATAACGGGGGAGGACACTGGTTTTCTTCAGGGTCTCAGTCATCTCAACTCGGGATTCAAGAGGAGGACCGAGTCAATTCTTTGATTAAGAAAATGACTGTAAACAATTCAGTTATCATTGCAGGTGAAGGTATGATTGGACGGGCTGCATTTACAGGAAGCCATCAGTGGATTCTTTTGAACAGTTTCACAAAAGATGTAAATCCACCTGAGTTATACCCTGAAGTGCATCACCAATTTTCAGCTGGAATACAGACTATAGCAGTTATTCCTGTACTTCCTCACGGGGTTGTTCAACTTGGTTCTTTCTTACCTATAAATGAGAATATGGGTTTTGTGAATGATGTGAAGAGCTTGATCTTGCAATTAGGATGGGTTCCTGGTGCCCTTCTATCTGAAGACTATTCAGAAAATCTCTCTATTGAACGACTTGCTGGACCTTCCATTACTGGTGTGCCGCTGTCTATTGATCCACCTGCCGTTGCCTCAAATGGCACTCCCTCAGTAACTGATGGCTCCAATCAGAAAAGTAATCCATCTCATACTTCAAGGCCTTTTGTTCATACACCTTGCCCTTTAAATGCAGAGACAAATACCTGCCAGGGTTCTGCACTGACACCAGAAACCTGTAAACTGAACCGGATATCCAGCAACCATTGTCAACCAAAGGTTATTCCAATGAGTAAAGCAAACTTTTCTGGCCAACAAGAGAGTAGAGCTATGGAGGCTGAAATGATAATCTCAGATGCTGATTCATGCCTGCAGCAGCATTCTGTGTCATATAATGCAAGATCTGCATTCAATAACTTGACTGCTTCTGGGTCTTTTGGTCAATCTTGTCTAAGTGATGATCATCTAACATTAATGGAGCAACAAATCTTATCAGCCATTGGGAATCGAGATAATGTTAATCCTTGTTTTAATGTGTCAAGTACATTAAACATGCCTCATCCAAACACAGATAGAGGCCACATACTTGGTCACTGTTTGAGTTCTAGCAGTGCTCCTTTACCAGGAGGAATCCCAATACATGGTGGAATGAGTACTCTTTTGAGGTCAAATCTGATTACTAGTCCTGGTTCAAAATCTCCCAAAGCATCCACAGGTGATTTATCTGGAGCAGAAGTTGGGATTGGACTTCAAAATTCTGATTCTTCAACTAAAGCAAGGGGTTGTTCTTTGATGAATTTGACTAGTCAATCCGGCACCTTTCCCATGCATGTAGAAGGTTCTAATCAGAACATGCTCCCTGTAGATTTCAAGTGTGTTTCAACAAATCAAAAGATAGACTATGATTTGCTTCAGGCCCCTAACCTCCCCACTTTCCATGTTGAGAAACGTTTGCCCATTAGTGGTCAAATCCATGATTGCCTTAGTAAAGAGGGTAGTATTCAATCTATGATGGCAATGAATCCTAAACTCAAACTAGATTGTACTAAACCTCCATCAGGTGATGATGACCTGTTTGATGTTTTAGGAGTAGATATGAAAAACAAATTGCTGAATGGAAATTGGAATAAACTCTTTACAGATGAATTGGATGCAAATACAGAAAATATGGACAAGAAGTTAGAACCTATGAATATGCTGGGCACAACTACAAATCCTGATATATATTCAGTTAAAGAAGCAATAGCAGACAGTGGCATATTTTCTGGGACGGGAACAGACCAGCTCTTGGATGCAGTGGTCTCCAAAGCCAAATCTGTTGTAAAACAGGATTCTGATGACATGTCTTGCAGGACAACATTGACAAGGAATAGTACCTCCTCTGTTCCCTCTCCTGCCTGCAGGCCGGTTATGTCTGGTCATTTCCAAGGGGGAATATTTGATTTTCCTAAGAATGGTGGTAAAACAGGTGCCACAGAAGCTAGTATTCTCAGGTCCAGATGTAACAAGGAAGATGCTGGAAACTGTTCTCAAACTAGTTCTGCTTATGGCTCCCAACTTAGTTCGTGGGTTGAGAACAGTGGGAGTGTTAAACGTGAGAATAGTGTTTCAACTGGATACTCAAAGCAGCCAGATGAGGCTTGCAAACCCAATCGTAAAAGGCTTAAACCAGGAGAGAATCCCAGACCTCGTCCGAAAGATCGCCAAATGATTCAAGATCGAGTGAAAGAGTTACGGGAAATTGTGCCAAACGGAGCAAAATGTAGCATAGATGCACTTTTGGAACGGACCATTAAGCACATGCTTTTCTTGCAAAGTGTGACAAGGCATGCTGACAAGCTAAAACAAACAGGGGAGTCTAAGGTTATTAATAAGGAAGGTGGGCTGCTTTTGAAAGACAACTTTGAGGGAGGAGCTACATGGGCATATGAAGTTGGCTCACAATCAATGGTTTGTCCTATTGTAGTTGAGGATCTGAATCCTCCTCGTCAAATGCTAGTGGAGATGCTTTGTGAGGAGCAAGGTTTCTTTTTGGAAATAGCCGACTTAATCAGAGGATTAGGTTTAACCATATTGAAAGGAGTAATGGAAGCTCACAATGACAAAATCTGGGCACGCTTTGCTGTTGAGGCAAACAGGGATGTAACAAGGATGGAAATATTCATGTCACTTGTTCATCTTTTGGAGCAAACAGTGAAGGGAAAAGCATCTTCATCCAATGCAATTGATAACATGGTGTATCACACTTTTCCACAGGCTGCTCAGATACCAGCAACTGGAAGGCCCAGTGGTTTGCAATGA 2865 0.4206 MGFLLKEALRTLCGRNQWSYAVFWKIGCHNSKLLIWEECYYEPLPCPPPMFGIGDLPYHNGGGHWFSSGSQSSQLGIQEEDRVNSLIKKMTVNNSVIIAGEGMIGRAAFTGSHQWILLNSFTKDVNPPELYPEVHHQFSAGIQTIAVIPVLPHGVVQLGSFLPINENMGFVNDVKSLILQLGWVPGALLSEDYSENLSIERLAGPSITGVPLSIDPPAVASNGTPSVTDGSNQKSNPSHTSRPFVHTPCPLNAETNTCQGSALTPETCKLNRISSNHCQPKVIPMSKANFSGQQESRAMEAEMIISDADSCLQQHSVSYNARSAFNNLTASGSFGQSCLSDDHLTLMEQQILSAIGNRDNVNPCFNVSSTLNMPHPNTDRGHILGHCLSSSSAPLPGGIPIHGGMSTLLRSNLITSPGSKSPKASTGDLSGAEVGIGLQNSDSSTKARGCSLMNLTSQSGTFPMHVEGSNQNMLPVDFKCVSTNQKIDYDLLQAPNLPTFHVEKRLPISGQIHDCLSKEGSIQSMMAMNPKLKLDCTKPPSGDDDLFDVLGVDMKNKLLNGNWNKLFTDELDANTENMDKKLEPMNMLGTTTNPDIYSVKEAIADSGIFSGTGTDQLLDAVVSKAKSVVKQDSDDMSCRTTLTRNSTSSVPSPACRPVMSGHFQGGIFDFPKNGGKTGATEASILRSRCNKEDAGNCSQTSSAYGSQLSSWVENSGSVKRENSVSTGYSKQPDEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTRHADKLKQTGESKVINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIVVEDLNPPRQMLVEMLCEEQGFFLEIADLIRGLGLTILKGVMEAHNDKIWARFAVEANRDVTRMEIFMSLVHLLEQTVKGKASSSNAIDNMVYHTFPQAAQIPATGRPSGLQ 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01366 954 CDD bHLH_AtLHW_like 747 816 - -
Phco10g01366 954 MobiDBLite consensus disorder prediction 219 246 - -
Phco10g01366 954 MobiDBLite consensus disorder prediction 734 758 - -
Phco10g01366 954 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 177 IPR025610 -
Phco10g01366 954 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 948 IPR043561 GO:0003700|GO:0006355
Phco10g01366 954 MobiDBLite consensus disorder prediction 213 246 - -
Phco10g01366 954 MobiDBLite consensus disorder prediction 715 732 - -
Phco10g01366 954 MobiDBLite consensus disorder prediction 715 758 - -
Phco10g01366 954 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 743 792 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01366 Phco-Chr10 36261026 36267065 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01366 10 36261026 36267065 Phco10g01366 10 36261026 36267065 ECH
Phco10g01366 10 36261026 36267065 Phco9g01096 9 9791781 9797233 PCT