Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01043 ATGACCGACGTGCTTCATTTCTCTTCTTCTTCGTCGCCAACCGCTTCTTCCTCTGACGGCATTTTGATTGTCTCCGCCGAGCAAGAACCGGCGCCACCCTCATCTGCGGTGGTGGAGGGGTTTGCTACGGTCACCGACTGTGACGCACGCGGGGTCACAGACAGGACGCAACAGGAGCTGTCGCTGTTGGCCATTCTTGTGACCCTTTTGAGGAAATCTTTGATTGCTTGCAAGAGTGAGGGGAGAGGTGACCTCTGCGCCATGGAGATTGGCTGGCCCACTAACGTGCGCCATGTTGCACATGTCACGTTCGACAGGTTCAATGGCTTCTTGGGCTTGCCACGTGAGTTCGAACCAGAAGTCTCCACAAGGTCTCCCAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTATCATATGACACCAGAGGGAACAGTGTTCCAACCATACTTTTACTAATGCAAAGGCACTTGTATGCTCTCGGAGGGTTGCAGGCAGAGGGGATTTTCAGAATTAATGCTGATAATACTCAAGAGGAGAATGTTAGGAATCAATTAAACAGGGGATTGGTCCCAGAAGATGTTGATATACATTGTTTAGCTGGACTAATTAAGGCTTGGTTTAGGGAGCTTCCTACTGGTGTTCTGGATTCTTTATCACCAGAGCATGTAATGCAATGCCAGACTGAAGATGATTGTGCAGAACTGGTGAGGCAGCTACCTCAAACCGAAGCTTCCCTCTTGGACTGGGCTATCAATCTGATGGCTGATGTTGTCCAAGAGGAACGCCTGAACAAGATGAATGCACGCAACATCGCCATGGTTTTTGCACCAAACATGACTCATATGGCAGACCCTTTGATTGCATTGATGTATGCAGTTCAAGTTATGAACTTCCTGAAAACACTTGTGTTAAGGACACTACGAGAAAGAAAGGATTGTGTGGTAGAATCGTCTCCTGGGTTTTGTCTAGAGCCTTCTGATGAGAATGGGGATCACAGTCTTTTGGAGTCCTGTCAACAAGATGATGTTTCCACTGAAAGTGAAGAGTCTGGGGAAACCTTTGTTTCTGAGGAAACTGTGTTAGAATGTTCCCCTGATTCTCTCCAAAACAAATATTCAACTGAAGGAGAATGTGGCAGTTTGATAGGCTCTTCTGAGAATCTGGATTTTGAGGAGGAGTTACATTGTGAGTTTCCAACCAAAGGAAACATTGGAAAGAGTAAGAGTGGACAATCAAGTAATTCCAGTGCTAAAAAGGGGTCCAAGAAAACCAGAGGCCTGCAACCTGTGATCCATGCAACAGTGGCTGCTGATAAAAAGGGCATCAGCAATCTGAGCCGCATAGATTCAAGATCAGAGAGAATAGAAGCCTGGCGGTGA 1395 0.4681 MTDVLHFSSSSSPTASSSDGILIVSAEQEPAPPSSAVVEGFATVTDCDARGVTDRTQQELSLLAILVTLLRKSLIACKSEGRGDLCAMEIGWPTNVRHVAHVTFDRFNGFLGLPREFEPEVSTRSPSASATVFGVSTESMQLSYDTRGNSVPTILLLMQRHLYALGGLQAEGIFRINADNTQEENVRNQLNRGLVPEDVDIHCLAGLIKAWFRELPTGVLDSLSPEHVMQCQTEDDCAELVRQLPQTEASLLDWAINLMADVVQEERLNKMNARNIAMVFAPNMTHMADPLIALMYAVQVMNFLKTLVLRTLRERKDCVVESSPGFCLEPSDENGDHSLLESCQQDDVSTESEESGETFVSEETVLECSPDSLQNKYSTEGECGSLIGSSENLDFEEELHCEFPTKGNIGKSKSGQSSNSSAKKGSKKTRGLQPVIHATVAADKKGISNLSRIDSRSERIEAWR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01043 464 FunFam Rho GTPase-activating protein 5 120 313 - -
Phco9g01043 464 Gene3D Rho GTPase activation protein 120 320 IPR008936 -
Phco9g01043 464 CDD CRIB 88 128 - -
Phco9g01043 464 Gene3D CRIB domain 87 119 IPR036936 -
Phco9g01043 464 SUPERFAMILY GTPase activation domain, GAP 130 308 IPR008936 -
Phco9g01043 464 MobiDBLite consensus disorder prediction 404 440 - -
Phco9g01043 464 ProSiteProfiles Rho GTPase-activating proteins domain profile. 135 320 IPR000198 GO:0007165
Phco9g01043 464 SMART RhoGAP_3 149 309 IPR000198 GO:0007165
Phco9g01043 464 PANTHER MKIAA1688 PROTEIN 3 430 IPR044785 GO:0005096
Phco9g01043 464 ProSiteProfiles CRIB domain profile. 90 103 IPR000095 -
Phco9g01043 464 MobiDBLite consensus disorder prediction 409 427 - -
Phco9g01043 464 SMART PBD_5 90 124 IPR000095 -
Phco9g01043 464 Pfam RhoGAP domain 152 286 IPR000198 GO:0007165
Phco9g01043 464 CDD RhoGAP 152 307 - -
Phco9g01043 464 MobiDBLite consensus disorder prediction 338 364 - -
Phco9g01043 464 Pfam P21-Rho-binding domain 89 116 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01043 Phco-Chr9 8964189 8967411 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01043 9 8964189 8967411 Phco9g01043 9 8964189 8967411 ECH
Phco10g01398 10 36617545 36621085 Phco9g01043 9 8964189 8967411 PCT