Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00824 ATGGGAAAGACCACTACCCTTTTGCTCTTCCTCTTAGTTCTTCTCTGCCATGGAGCAATGGCCATCCCTGAAGGTAAAGAAGACAGCTTGTTCTTGATGCACAGCCCCAAGAGAGTGGTGAAGACCGATGCAGGGGAAATGTATGTGCTGAAAACCCAAAGTGGTTGTAGGAGGTTTTTGGATAGGCACATGCATATTGGCTTCATCACTATGGAACCAAAGTCTTTGTTCGTCCCTCACTACCTTGACACCAATCTCATCATATTCATCCGTAAAGGGGAAGCAAATTTGGGATTCATGTATGATGATGAACTAGTGGAAAAGAGATTGAAGACAGGAGACTTGTATGTGATTCCATCAGGTTCAGCATTTTATTTTGTGAACACAGAGGAAGGTCAGAGACTTCACATCATCTGCAGCATTGACCCCTCTACAAGCTTGGGATTAGATACCTTCCATTCCTTCTATATTGGGGGAGGAGCCAATTCACCCTCACTGCTTTCTGGATTCGCACCTGCTATTCTTGAAGCTGCATTTAATGAAACAAGAATGGAGGTAGAGAGTATCTTTTATACGGAACTAGATGGGCCAATTATGTACATGGATGATTCTCGTGTACCAAGCTTAGGGACTAAATTCCTTCAACTGGAGAAAGAAGAAAAAGAGCAACACCTGAAGAAAATGCTGCTAGACCAAGAAGAAGAAAAAGAAGAGGAGCATCAAACAAGTAGATCATGGAGAAAACCCTTGGAAACTGTATTTGGCAAGGTGAATGAGAAGACAGAGAGGAAAAACAGTATTGATTGGAGCGTGGCAAAAAACCTCTATGACAGAAAACCTGATTTCAGAAACGATTATGGTTGGAGCAAGGCACTGGATGGAGGAGAGTATCCTCCACTCACCAAACCTGACATTGGTGTCTTCCATGTCTATCTCACAGCGGGATCCATGGTGGCACCTCATGTGAATCCAAGAGCATCTGAGTATGGCATAGTGTTGAAGGGCAGTGGTGAGCTTCATATAGTGTATCCAAATGGAAGCAAAGCAATTAGCACTGAAATCAAACAAGGGGATGAGTTTGTTGTTCCTAGATACTTCCCCTTCTGTCAAATAGCATCAAAGGATGGACCCTTAGAGTTCTTTGGCTTCTCCACCTCTGCCAGGGAGAACAAGCCACAATTTCTGGCTGGTTCTGTGTCCCTTCTTAGGACCTTCCTGGGGCCTCAGCTTGCGGCGGCGCTTGGGGTGAGTCAGTACACTTTGCGGCGTGCCCTTGATCCTCAGGATGAGGCTGTGATCCTGCCACCACCATAA 1314 0.4521 MGKTTTLLLFLLVLLCHGAMAIPEGKEDSLFLMHSPKRVVKTDAGEMYVLKTQSGCRRFLDRHMHIGFITMEPKSLFVPHYLDTNLIIFIRKGEANLGFMYDDELVEKRLKTGDLYVIPSGSAFYFVNTEEGQRLHIICSIDPSTSLGLDTFHSFYIGGGANSPSLLSGFAPAILEAAFNETRMEVESIFYTELDGPIMYMDDSRVPSLGTKFLQLEKEEKEQHLKKMLLDQEEEKEEEHQTSRSWRKPLETVFGKVNEKTERKNSIDWSVAKNLYDRKPDFRNDYGWSKALDGGEYPPLTKPDIGVFHVYLTAGSMVAPHVNPRASEYGIVLKGSGELHIVYPNGSKAISTEIKQGDEFVVPRYFPFCQIASKDGPLEFFGFSTSARENKPQFLAGSVSLLRTFLGPQLAAALGVSQYTLRRALDPQDEAVILPPP 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00824 437 SUPERFAMILY RmlC-like cupins 33 430 IPR011051 -
Phco9g00824 437 SMART Cupin_1_3 31 187 IPR006045 -
Phco9g00824 437 SMART Cupin_1_3 273 422 IPR006045 -
Phco9g00824 437 Gene3D Jelly Rolls 24 218 IPR014710 -
Phco9g00824 437 Coils Coil 216 238 - -
Phco9g00824 437 Pfam Cupin 274 418 IPR006045 -
Phco9g00824 437 Pfam Cupin 35 139 IPR006045 -
Phco9g00824 437 CDD cupin_7S_vicilin-like_N 39 209 - -
Phco9g00824 437 Gene3D Jelly Rolls 269 437 IPR014710 -
Phco9g00824 437 PANTHER OS03G0336100 PROTEIN-RELATED 6 436 - -
Phco9g00824 437 CDD cupin_7S_vicilin-like_C 280 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00824 Phco-Chr9 6376768 6379401 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01549 10 38272671 38274928 Phco9g00824 9 6376768 6379401 PCT