Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00782 ATGATTATCACTCTGTCCGCAATGGTTTCTGCTTCGAATTTGTTATTTTCCCGCCTTGGAATCACATCACAATTGTGGGTTGGTGTGGCTGTGGACAATGCTGCAACTCTAATACCGGTCTATTCTAGGTTGTTAAGGAAACACTTCTCATATTGTTCTGAGGACTTTGAATACAAAGGAGGACCATTTTCAGCAAGGGATGATTTTTGGCTTGACCTTTTGAAATTCATGCCATGTCGGGAGTTTTCCTTGCAGTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGATGGTGCCGGACGATCTTTTGCGACATCGTTTTCTGGTCAGTCTGGTGCAGCCTCCCCAATTTTTCATCACACTGGAGCTATTCAAGGATTGCACAATATTCATGGGAGCTTTAATGTTCCCAACATGCCTGGTTCACTAACGTCGAGAAATTCAACTATAAATAATGTACCATCAGGCGGTGTTCAACAACCCACCGGAAACCTTTCTAGTGGAAGATTTACATCCAACAATCTACCAGTTGCATTGTCTCAGCTATCTCATGGAAGCTCTCATGGACATTCAGGAGTCACCAATAGAGGAGGTATAAGTGTTGTAGGAAACCCTGGATTTAGTAGTAGCACAAATGGAGTTGGTGGTTCTATTCCTGGGATTCTTCCTACATCTGGTGCAATTGGTAACCGAAATGCTGTTCCAGGGTTGGGAGTGTCCCCGATTTTGGGAAATGCAGGTCCTCGAATCACTAGTTCTGTGGGAAACATGGTTGGTGGAGGGAATATCGGAAGGACTGGTGGAGGATTGTCTGTGCCTGCTCTTGCATCTCGTCTAAATTTGGGTGCAAACAGTGGATCCAGTGGTTTAGGTATGCAAGGACAGAATCGATTAATGAGTGGTGTGCTCCCACAAGGGTCTCCACAGGTAATTTCAATGCTAGGAAATTCTTATCCCAGCGCTGGAGGTCCACTTTCCCAAAGCCATGTTCAAGCAGTGAGTAACTTGAACTCTATGGGAATGTTGAATGATGTGAATACCAATGACAGTTCCCCTTTTGACATCAACGACTTCCCTCAACTGACAACTCGTCCTAGTTCTGCTGGAGGGCCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTCTTGGTGTCAGTCCCATTGTTCAACAAAACCAAGAGTTCAGCATTCAGAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGCGGTAATGCAGATTATGCTATGGATATTCACCAGAAAGAACAACTTCATGACAATGCTGTACCAATGATGCAATCTCAACATTTCTCTATGGGAAGGTCGGCTGGTTTCAGCTTAGGGGGTACATATTCATCACATCGAGCACAACAGCAACAGCATGCTCCTTCAGTCAGTAGTGGCAATGTCTCTTTTTCATCTGTTAACCAGGATATTCTCCATTTGCATGGATCAGATATTTTCCCATCTTCACATTCAACCTATCATTCACAGACCAGTGGACCTCCTGGTATTGGATTAAGGCCTTTAAATTCTCCAAATACAGTTTCTGGTATGGGTTCATACGACCAGCTTATCCAGCAATATCAACAGCATCAAAACCAGTCGCAGTTCCGCCTACAAATGTCAGCTGTAAATCAATCTTTTAGAGATCAGGGCATGAAGTCTATTCAAACCACACAACCAGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCTGACCTTACATCTCTTGCTCTTGGAATTGATCTTACTACACTGGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACCTTTGGTTCTCCATGGTCTGATGAACCTGCTAAGGGCGATCCAGAATTTAATGTGCCACAATGTTATTATGCTAAACAGCCACCCGATCTACATCTAGGATACTTTTCAAAGTTTTCGGTGGAAACATTGTTTTACATATTTTACAGCATGCCCAAAGATGAAGCACAATTATATGCCTCCAATGAGCTTTACAACAGAGGTTGGTTTTACCACAAAGAACATCGTTTGTGGTTTATAAGAGTTTCCAACATGGAGCCGCTGGTTAAAACAAACACATACGAGAGAGGATCTTATCACTGTTTCGAACCAAGCATATTTGAAACCGTCCGCAAGGATAATTTTGTTCTTCATTATGAAATGTTGGAAAACAGACCTCATCTGCCTCAACATTGA 2214 0.4277 MIITLSAMVSASNLLFSRLGITSQLWVGVAVDNAATLIPVYSRLLRKHFSYCSEDFEYKGGPFSARDDFWLDLLKFMPCREFSLQSSLNGSASNLPDGAGRSFATSFSGQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGSLTSRNSTINNVPSGGVQQPTGNLSSGRFTSNNLPVALSQLSHGSSHGHSGVTNRGGISVVGNPGFSSSTNGVGGSIPGILPTSGAIGNRNAVPGLGVSPILGNAGPRITSSVGNMVGGGNIGRTGGGLSVPALASRLNLGANSGSSGLGMQGQNRLMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHVQAVSNLNSMGMLNDVNTNDSSPFDINDFPQLTTRPSSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDIHQKEQLHDNAVPMMQSQHFSMGRSAGFSLGGTYSSHRAQQQQHAPSVSSGNVSFSSVNQDILHLHGSDIFPSSHSTYHSQTSGPPGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQFRLQMSAVNQSFRDQGMKSIQTTQPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFNVPQCYYAKQPPDLHLGYFSKFSVETLFYIFYSMPKDEAQLYASNELYNRGWFYHKEHRLWFIRVSNMEPLVKTNTYERGSYHCFEPSIFETVRKDNFVLHYEMLENRPHLPQH 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00782 737 PANTHER CCR4 NOT-RELATED 127 731 IPR040168 GO:0030015
Phco9g00782 737 MobiDBLite consensus disorder prediction 492 520 - -
Phco9g00782 737 FunFam probable NOT transcription complex subunit VIP2 isoform X1 555 737 - -
Phco9g00782 737 Pfam NOT2 / NOT3 / NOT5 family 606 728 IPR007282 GO:0006355
Phco9g00782 737 Gene3D - 556 737 IPR038635 -
Phco9g00782 737 MobiDBLite consensus disorder prediction 449 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00782 Phco-Chr9 5840520 5849850 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00782 9 5840520 5849850 Phco9g00782 9 5840520 5849850 ECH
Phco10g01585 10 38637967 38645567 Phco9g00782 9 5840520 5849850 PCT