Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01585 ATGTCGAGCTTACTTAATTCTTCTCTGAACGGGTCTGCTTCAAATCTTCCAGATGGTGCTGCTGGGCGCTCCTTTGCTACTTCATTTTCTGGTCAGTCTGGTGTAGCTCCCCCAGTTTTTCAACTCTCTGGTTCTATTCAGGGATTGCACAACATTCACGGGAGCTATAATGTACCCAATATGCCCAGTTCACTTACATCAAGAAACTCAACGTTAAATAGTGTTCCTTCTGGGGGAGGAGTTCAACAACCTTCAGCAAGCCTTTCAAGTGGAAGATTTGCGTCAAATAATCTACCCGTTGCTCTGTCACAGCTATCTCATGGAAGCTCCCATGGACATTCAGGAGTCAACAGTAGAGGAGGTATAAGTGTTATAGGAAATCCTGGATTTAATAGTAGCACAAATGGAGTTGCTGGTCCTATTCCTGGGATTCTTCCAACTTCTGCTGCAATTGGTAATCGAAATGCTGTTCCAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTCCTCGAATCACCAGTTCGATGGGAAACATGGTTGGTGGGGGGAACATTGGGAGGATAAGCTCTGGAGGATTGTCTGTTCCTGGCCTCGCTTCTCGTATAAATTTAGGTGGAAATGCTGGATCTGGTGGTTTAGGTGTGCAAGGACAGAATCGATTGATGAGTGGTGTTCTTTCGCAAGGATCTCCACAGGTAATTTCAATGCTAGGAAATTCCTATCCTAGTGCTGGAGGTCCACTTTCACAAAGTCATGTTCAAACAGTAAATAACTTGAACTCTATGGGGATGCTGAATGATGTGAATTCTGGTGACAGTTCACCTTTTGATATCAATGACTTCCCTCAACTGACCACTCATCCTAGTTCTGCTGGTGGGCCTCAAGGACAGTTGGGTTCTTTACGAAAACAGGGTCTTGGAGTTAGTCCCATTGTCCAACAAAACCAAGAGTTTAGTATTCAAAAGGAAGACTTCCCAGCTTTACCAGGATTCAAAGGTGGTACTGCCGATTTTGCAATGGATATGTACCAGAAAGAACAACTTCATGATAACACTGTGTCAATGATGCAATCTCAGCATTTCTCCCAGATGGGGAGATCTTCTGGTTTCAGTTTGGGGGGATCATATCCATCACATCGTACACAGCAGCAACAGCAACAGCAGCATACCCCTTCAGTCAGTGGTAATGGTGTCTCCTTTTCATCTGTAAACAATCAAGATCTTCTCCATTTGCATGGAACAGATATGTTTCCATCTTCACATTCAACTTATCATTCCCAGACCAGTGGACCTCCTGGCATTGGACTAAGGCCTCTAAATTCTCCAAATACTGGTATGGGTTCATATGACCAGCTTATTCAGCAGTATCAACAGCAGCAGAACCAGTCCCAGTTCCGCCTTCAGCAAATGTCAGCTGCAAATCAGTCTTTTAGGGATCAGGGAATGAAGTCTATGCAAAGTGTGCAATCTAGTCCAGATCCATTTGGTGCACTTGGATTGTTCAGTGTAGTCCATATAAGTGATCCTGACCTGAAATATCTTGCTCATGGGATTGATCTCACAACGCTTGGTTTGAATTTGAATTCATCAGAAAATCTTTACAAGACTTTTCGATCTCCATGGTCTGATGAACCGGCCAAGGGTGATCCAGAGTTCAGTGTGCTACAATGTTATTATGCTAAACAGCCGCCTGCCCTACATCAAGGTTATTTTTTGAAGTTTTCGGTGGAAACATTGTTTTACATATTTTACAGCATGCCCAAGGATGAAGCACAACTATATGCAGCAAATGAACTTTACAAAAGAGGTTGGTTTTATCATAAAGAACATCGTTTTTGGTTTATAAGAGTTGCCAACATGGAGCCGCTTGTCAAAACAAATACATACGAGAGAGGATCTTACCACTGTTTTGATCCAACTACCTTTGAAACAGTCCGGAAGGATAATTTTGTTCTTCATTATGAGTTGGTGGAAAAGAGACCGTCTTTGCCTCAACCTCAACGTTAA 2010 0.4303 MSSLLNSSLNGSASNLPDGAAGRSFATSFSGQSGVAPPVFQLSGSIQGLHNIHGSYNVPNMPSSLTSRNSTLNSVPSGGGVQQPSASLSSGRFASNNLPVALSQLSHGSSHGHSGVNSRGGISVIGNPGFNSSTNGVAGPIPGILPTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVGGGNIGRISSGGLSVPGLASRINLGGNAGSGGLGVQGQNRLMSGVLSQGSPQVISMLGNSYPSAGGPLSQSHVQTVNNLNSMGMLNDVNSGDSSPFDINDFPQLTTHPSSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQKEDFPALPGFKGGTADFAMDMYQKEQLHDNTVSMMQSQHFSQMGRSSGFSLGGSYPSHRTQQQQQQQHTPSVSGNGVSFSSVNNQDLLHLHGTDMFPSSHSTYHSQTSGPPGIGLRPLNSPNTGMGSYDQLIQQYQQQQNQSQFRLQQMSAANQSFRDQGMKSMQSVQSSPDPFGALGLFSVVHISDPDLKYLAHGIDLTTLGLNLNSSENLYKTFRSPWSDEPAKGDPEFSVLQCYYAKQPPALHQGYFLKFSVETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRFWFIRVANMEPLVKTNTYERGSYHCFDPTTFETVRKDNFVLHYELVEKRPSLPQPQR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01585 669 MobiDBLite consensus disorder prediction 357 410 - -
Phco10g01585 669 MobiDBLite consensus disorder prediction 265 298 - -
Phco10g01585 669 PANTHER CCR4 NOT-RELATED 47 661 IPR040168 GO:0030015
Phco10g01585 669 MobiDBLite consensus disorder prediction 265 303 - -
Phco10g01585 669 Gene3D - 485 669 IPR038635 -
Phco10g01585 669 MobiDBLite consensus disorder prediction 60 92 - -
Phco10g01585 669 Pfam NOT2 / NOT3 / NOT5 family 536 656 IPR007282 GO:0006355
Phco10g01585 669 MobiDBLite consensus disorder prediction 357 434 - -
Phco10g01585 669 MobiDBLite consensus disorder prediction 417 434 - -
Phco10g01585 669 FunFam probable NOT transcription complex subunit VIP2 isoform X1 486 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01585 Phco-Chr10 38637967 38645567 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01585 10 38637967 38645567 Phco9g00782 9 5840520 5849850 PCT