Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00777 ATGGAGTTCATCTATCTACTCTACCTCGTCCCAATGTTGTACTCGTGTTTTCTCATCTGGAAAATGTTGGAGGAGAGACGCGACAGGGAGTGTTACATCCTCGACTACCAATGCTACAAGCCCCCCAACAACCGAATGCTGGGCACTGAGTTCTGTGGGAAACTCATCAAAAGAACCGAAAATTTGGGTCCCAGCGAGTACCGTTTTCTGCTCAAGGCCATCGTCAGCTCCGGCATCGGCGAACAAACTTATGCGCCAAGAAACATCTTCGAGGGTCGCGAGGGAACGCCCACATTGTTCGACGGCATCGAAGAGATGGAAGAGTTCTTCAACGACGCCATCGCCAAGCTCCTCGCCAAATCAAAAGTCTCCCCCTCCGAGATCGACATCCTCGTCGTCAACATCTCCATGCTCGCCGCCGTCCCCTCCCTCTCTTCTCAAATCATCAACCTATACAAGCTCCGCCATGACGTCAAGGTCTACAACCTCACCGGCATGGGTTGCAGCGCCAGCCTGATCTCCATGGACATTGTCAAAAGCATCTTCAAGACGCAGAGGAACAAGCTGGCGTTGTTGATCACCTCCGAGTCCCTCAGCCCCAACTGGTACACCGGCAACGACAGATCCATGATCCTCGCCAACTGCCTGTTCCGCTCCGGCGGCTGCGCGATTCTCTTGACCAACAAACGGTCTTTGAAGGACAGAGCCATGCTGCGGTTGAAGTGCCTGGTGAGGACGCATCACGGTGCCAGAGAAGAGGCTTACGGTTGCTGTGTTCAGCGGGAAGACGACCAGGGAAGGCTAGGGTTTCACCTTGCGAAGACGCTTCCCAAGGCCGCAACCCGAGCCTTCGTTGATAATCTTCGAGTCATAGCACCCAAGATATTACCTGTCCGTGAGTTGCTCAGGTTTTTGTTCATGTCGCTGATTAAAAAAGTGAACAAAAACAACAGTCCTAAGTCTGCGAGCACTGGAGCTACTAAATCTCCGTTGAACTTCAGAACAGGGGTGGATCATTTTTGCTTGCATACCGGAGGAAAAGCTGTGATCGACGGCATTGGAATGAGCTTGGATCTGAGCGAGTACGACCTGGAACCGGCTAGGATGACGCTGCACCGTTTCGGGAACACGTCAGCCAGTAGCCTGTGGTACGTGTTATCGTACATGGAAGCGAAGAAGAGGTTGAAGAAGGGTGACACGGTGTTCATGATAAGCTTTGGTGCAGGCTTTAAATGTAACAGCTGTTTGTGGGAGGTGATGAAGGACTTGGGAGACCCAAATGTGTGGGACGACTGCATTGATGACTACCCACCGGAGTCATTAGAGAACCCTTTCATGAAGACCTACGGTTGGATCAACGAGGTTGAGGACCCCTACACTTACGAAAATATCCCTGATTTTCTCAAGTGA 1410 0.5177 MEFIYLLYLVPMLYSCFLIWKMLEERRDRECYILDYQCYKPPNNRMLGTEFCGKLIKRTENLGPSEYRFLLKAIVSSGIGEQTYAPRNIFEGREGTPTLFDGIEEMEEFFNDAIAKLLAKSKVSPSEIDILVVNISMLAAVPSLSSQIINLYKLRHDVKVYNLTGMGCSASLISMDIVKSIFKTQRNKLALLITSESLSPNWYTGNDRSMILANCLFRSGGCAILLTNKRSLKDRAMLRLKCLVRTHHGAREEAYGCCVQREDDQGRLGFHLAKTLPKAATRAFVDNLRVIAPKILPVRELLRFLFMSLIKKVNKNNSPKSASTGATKSPLNFRTGVDHFCLHTGGKAVIDGIGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLSYMEAKKRLKKGDTVFMISFGAGFKCNSCLWEVMKDLGDPNVWDDCIDDYPPESLENPFMKTYGWINEVEDPYTYENIPDFLK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00777 469 SUPERFAMILY Thiolase-like 243 420 IPR016039 GO:0016746
Phco9g00777 469 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 451 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phco9g00777 469 SUPERFAMILY Thiolase-like 18 231 IPR016039 GO:0016746
Phco9g00777 469 CDD CHS_like 19 417 - -
Phco9g00777 469 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Phco9g00777 469 Gene3D - 75 419 IPR016039 GO:0016746
Phco9g00777 469 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 337 418 IPR013747 -
Phco9g00777 469 PANTHER 3-KETOACYL-COA SYNTHASE 17 438 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00777 Phco-Chr9 5778662 5780071 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01587 10 38657115 38658533 Phco9g00777 9 5778662 5780071 PCT