Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01587 ATGGAGTTCCTCATATTACTTTATGGTGCAACAACACTGTACTTGTGTTTCCTGATCTGGAAAGTGTTTGATCAGAGAAGGGACCAAGAGTGTTACATATTGGAGTACCAACTGTACAAGCCAAGGGATGAAAGTAAGCTTGGAACTGAATGTTGTGGCAGGATCATAGAGAGGAACAAGCATTTGGGTCTGAATGAGTACAAGTTCCTCCTCAAAGCCATTGTCAACTCTGGCATTGGTGAGGAAACTTATGCCCCAAGCAACATCATCGAGGGTCGTGAGGCAACTCCAACACTGAACGATGGTGTTACAGAAATGGAGGGGTTTTTTCATGACAGCATTGCCAAGCTCCTTGCAAGGTCAGACATTTCCCCCTCACAGATCGATGTGCTTGTGGTGAATGTCTCTATGTTCTCCATTGCTCCTTCCTTGACTTCAAGAATCATAAACCACTACAAAATGAGGGAGGACATAAAGGCTTACAACCTCACTGGGATGGGTTGCAGTGCTAGCCTCATTTCATTGGACATCATTAGGAACGTTTTCAAGTCACAAAAGAACAAGTTTGCTCTTTTGGTGACTTCCGAGTCTCTCAGTCCAAACTGGTATAATGGCAACGACAGATCAATGATTCTTGCCAACTGTTTGTTCCGGAGTGGTGGGTGTGTCATACTTTTGACAAACAAAAGATCCTTCAAGCACAGGGCCATGTTGAGGCTGAAGTGTTTGGTGAGGACTCATCATGGGGCAAGAGAAGATGCCTATAGTTGCTGCAGTCAGAAGGAAGATGAGGAAGGGAGGCTTGGGTTTTACCTTGCCAAAAACCTTCCCAAGGCAGCTACAAGAGCCTTTGTTGATAATTTAAGGGTGTTGTCACCCAAGGTTTTGCCAACCAGGGAGTTGCTAAGGTTTATGGTTGTGTTCCTCATAAAAAAACTGAGGCAACCTAGTTCCCTTAAGTCTTCAAGTGGGGGATCTAATAAATCTAACAAATCTCCTTTAAACTTCAAGACTGGGATTGAACATTTTTGCCTCCACACAGGAGGAAAAGCTGTCATTGATGGGATTGGAATGAGCTTAGATCTGTGTGAATATGACCTTGAACCAGCAAGAATGACACTCCACCGGTTTGGGAACACTTCAGCTAGTAGCTTGTGGTACGTGCTGGGGTACATGGAGGCCAAAAAGAGGCTCATGAAGGGTGACAGAGTACTGATGATAAGCTTTGGGGCTGGCTTTAAATGCAACAGTTGTTTGTGGGAGGTAATGAAGGATCTGAGGGATCGTCCTAATGTGTGGAACGAATGCATTGATGACTACCCACCAGAGTCCTTGGCCAACCCTTTCATGGAGAAGTTTGGTTGGATCAATGATGTTCAAGAAGCAAGCAACTTGAAATTTCCAGCTTTTCTCAAGTAA 1419 0.4447 MEFLILLYGATTLYLCFLIWKVFDQRRDQECYILEYQLYKPRDESKLGTECCGRIIERNKHLGLNEYKFLLKAIVNSGIGEETYAPSNIIEGREATPTLNDGVTEMEGFFHDSIAKLLARSDISPSQIDVLVVNVSMFSIAPSLTSRIINHYKMREDIKAYNLTGMGCSASLISLDIIRNVFKSQKNKFALLVTSESLSPNWYNGNDRSMILANCLFRSGGCVILLTNKRSFKHRAMLRLKCLVRTHHGAREDAYSCCSQKEDEEGRLGFYLAKNLPKAATRAFVDNLRVLSPKVLPTRELLRFMVVFLIKKLRQPSSLKSSSGGSNKSNKSPLNFKTGIEHFCLHTGGKAVIDGIGMSLDLCEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLMKGDRVLMISFGAGFKCNSCLWEVMKDLRDRPNVWNECIDDYPPESLANPFMEKFGWINDVQEASNLKFPAFLK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01587 472 CDD CHS_like 12 420 - -
Phco10g01587 472 Gene3D - 59 422 IPR016039 GO:0016746
Phco10g01587 472 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 455 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phco10g01587 472 PANTHER 3-KETOACYL-COA SYNTHASE 14 442 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phco10g01587 472 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 340 421 IPR013747 -
Phco10g01587 472 Pfam FAE1/Type III polyketide synthase-like protein 25 313 IPR013601 GO:0006633|GO:0016020|GO:0016747
Phco10g01587 472 SUPERFAMILY Thiolase-like 62 423 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01587 Phco-Chr10 38657115 38658533 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01587 10 38657115 38658533 Phco10g01587 10 38657115 38658533 ECH
Phco10g01587 10 38657115 38658533 Phco9g00777 9 5778662 5780071 PCT