Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00660 ATGCAGCTGATCATGGTCTATCTAACGGAGTTTGCGTCTCTAGGTCTGCATTTTAGGAACTGCAGATTACTTGTCTTGCAGAAAGGATTAAAAATGAGTTGGAACCCACACATGGATGTCCATTACAATAGCATTAGCTATCCCTATAATACAGCAGGAAGCTTTATCGAATATTTTGAAGGTCTTACCTATGAACATGTCAACTTCATTTTTTCTGGTGCATCTCATGCTCAGGAGAGTTCATACCCTTCAAATTCAAGCTTTTACAAGTTTGGACTATCTGAACCTGAGAATTCATCGTACTATCGTTACAGTCATGGTTTTGAGGTAAATCATCACGAACCACTGGTGGATGAGTATAGGAGACCTTCAGAGAACTCATTGACAATGAATGAACAGACAGCAGCAGTAAGCACAGAATGGGTTGAAGGTGGAAACACTGACACACGAGACAATTCTATTGAATGTCCTCGAAGACATCATAGTAATTCCAGTGATTATCAGGTCATTTGGCAAGACAATATTGATCCGGACAACATGACCTATGAGGAACTACTTGAATTAGGTGAAGCTGTTGGAACTCAGAGCCGCGGTCTCACCCATGAACAGATCTCCTCACTCCCAGTGTCGAAGTTCAAATGTGGGTTCTTCTTGAGGAAGAAGTCACGGGGTGAGAGATGTGTGATTTGCCAGATGGAATATAAAAGAGGGGACAAGCGTATCACCTTGCCATGTAAACATCTTTATCATGCTAGTTGTGGTAACAGGTGGCTTAGCATCAATAAGGCATGCCCAATATGTTACACAGAAGTGTTTGCCGACAAGTCAAAGCACAAATAA 840 0.4167 MQLIMVYLTEFASLGLHFRNCRLLVLQKGLKMSWNPHMDVHYNSISYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQESSYPSNSSFYKFGLSEPENSSYYRYSHGFEVNHHEPLVDEYRRPSENSLTMNEQTAAVSTEWVEGGNTDTRDNSIECPRRHHSNSSDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTHEQISSLPVSKFKCGFFLRKKSRGERCVICQMEYKRGDKRITLPCKHLYHASCGNRWLSINKACPICYTEVFADKSKHK 279
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00660 279 ProSiteProfiles Zinc finger RING-type profile. 227 267 IPR001841 -
Phco9g00660 279 SMART ring_2 227 267 IPR001841 -
Phco9g00660 279 SUPERFAMILY RING/U-box 226 274 - -
Phco9g00660 279 Pfam Ring finger domain 226 267 IPR001841 -
Phco9g00660 279 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 35 273 IPR033276 GO:0004842|GO:0016567|GO:0046621
Phco9g00660 279 FunFam E3 ubiquitin ligase BIG BROTHER 189 272 - -
Phco9g00660 279 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 273 IPR013083 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco9g00660 Phco-Chr9 4918036 4922341 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01684 10 39377798 39380715 Phco9g00660 9 4918036 4922341 PCT