Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00652 ATGTCAGAGATTCATTTCCGATGCGATTCTGAGCTTGTTAGATCCACGACAAGGTTTCGTTTCCCAGATTCTTTTGTAAAAAATTCTTCCTCTGGCCATAAGTTTGTGCTTGAGAAGTTGACAAGGTTATGGTCTTCACATGATTTTTTGCCATTTTTTACGGGAAAGTTGGAAAAGATGGACCATGACAAGACTGGGTGCCAAGCTCCTCCTGAAGGTCCTATACTGTGCATCAACAACTGTGGTTTTTTTGGAAGTGCAGCTACCATGAATATGTGTTCTAAATGCCACAAAGACATGTTACTTAAACAGGAGCAGGCAAAGCTTGCAGCATCGTCCATTGGGAATATTATGAATGGGTCATCTAGCAGCACTGAAAATGAACCTGTTGTTGCTGCTGCTAATGTTGAAATCCCAGTTATTTCAGTAGAGCCTAAAACTTTCTCTGTACAACCTTTATTTGGTTCAGTTTCAGAGGGGAGTGAAGAGGCAAAGCCGAAGGATGGTCCAAAACGTTGCATCAGCTGCAATAAGCGAGTTGGTTTGACAGGGTTTAATTGTCGATGTGGCAATCTTTTTTGTGCTGTACATCGCTATTCAGACAAGCATAATTGCCCGTTTGATTACCGTACTGCTGCTCGGGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAGAAGCTTGATAAGATCTAA 699 0.422 MSEIHFRCDSELVRSTTRFRFPDSFVKNSSSGHKFVLEKLTRLWSSHDFLPFFTGKLEKMDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMLLKQEQAKLAASSIGNIMNGSSSSTENEPVVAAANVEIPVISVEPKTFSVQPLFGSVSEGSEEAKPKDGPKRCISCNKRVGLTGFNCRCGNLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00652 232 ProSiteProfiles Zinc finger AN1-type profile. 167 213 IPR000058 GO:0008270
Phco9g00652 232 PANTHER AN1-TYPE ZINC FINGER PROTEIN 72 232 - -
Phco9g00652 232 SUPERFAMILY AN1-like Zinc finger 159 227 IPR035896 -
Phco9g00652 232 Gene3D - 60 129 - -
Phco9g00652 232 FunFam Zinc finger AN1-type containing 6 149 228 - -
Phco9g00652 232 SMART A20_3 74 98 IPR002653 GO:0003677|GO:0008270
Phco9g00652 232 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 76 112 - -
Phco9g00652 232 ProSiteProfiles Zinc finger A20-type profile. 71 105 IPR002653 GO:0003677|GO:0008270
Phco9g00652 232 Pfam AN1-like Zinc finger 175 209 IPR000058 GO:0008270
Phco9g00652 232 Gene3D - 155 228 IPR035896 -
Phco9g00652 232 SMART AN1_Zf_4 173 210 IPR000058 GO:0008270
Phco9g00652 232 Pfam A20-like zinc finger 75 98 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00652 Phco-Chr9 4841131 4843557 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00652 9 4841131 4843557 Phco9g00652 9 4841131 4843557 ECH
Phco6g00255 6 2485365 2485883 Phco9g00652 9 4841131 4843557 ECH