Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00255 ATGGAGTCTCACGATGAAACAGGATGCCAGGCTCCAGAAAGGCCAATTCTTTGCACTAACAATTGTGGTTTCTTTGGAAGGGCTGCTACCATGAATATGTGCTCCAAATGTTACAAAGACACGCTGTTAAAGCAGGAACAAGACAAACTTGCAGCAGCCTCGGTTGAAAACATTGTGAATGGCGGTTCTGGCTGCAGCGGGAAACAGGCTGTGACTGCAGGTTCTGTGGATGTACAAGTTGGAAATGTGGAGATGAAGACAGTCTCTGCTGAGATTTCTGGAGATTCATCATCTGGTCAGAATTTGGAGATGAAAGCTAAGACAGGTCCCAGCAGATGTGCTACTTGCCGGAAGCGTGTCGGATTAACCGGTTTCAGCTGCAAATGTGGGAACCTCTTTTGTGCAATGCACCGCTATTCTGACAAACACGATTGCCCCTTTGATTATCAAACTGTTGGTCGTGAGGCTATAGCTAAAGCCAACCCTGCAATTAAGGCTGATAAGCTTGATAAAATCTAG 519 0.4605 MESHDETGCQAPERPILCTNNCGFFGRAATMNMCSKCYKDTLLKQEQDKLAAASVENIVNGGSGCSGKQAVTAGSVDVQVGNVEMKTVSAEISGDSSSGQNLEMKAKTGPSRCATCRKRVGLTGFSCKCGNLFCAMHRYSDKHDCPFDYQTVGREAIAKANPAIKADKLDKI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00255 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Phco6g00255 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 172 - -
Phco6g00255 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Phco6g00255 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Phco6g00255 172 SUPERFAMILY AN1-like Zinc finger 104 167 IPR035896 -
Phco6g00255 172 Pfam AN1-like Zinc finger 113 150 IPR000058 GO:0008270
Phco6g00255 172 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Phco6g00255 172 Gene3D - 1 60 - -
Phco6g00255 172 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Phco6g00255 172 Gene3D - 87 168 IPR035896 -
Phco6g00255 172 FunFam Zinc finger AN1-type containing 6 86 168 - -
Phco6g00255 172 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00255 Phco-Chr6 2485365 2485883 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00255 6 2485365 2485883 Phco6g00255 6 2485365 2485883 ECH
Phco6g00255 6 2485365 2485883 Phco9g00652 9 4841131 4843557 ECH