Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00634 ATGCAGAGGGCACCACTAGCACATTCCCATGAATTTGCCTTGAAGGAGACTTCTCCCAACATTGGGGCAGGTGCAGTCACAAGGGACAAGCTATCATGCACCTATGACCTTGTTGAACAGATGCAGTACCTCTATGTTCGCGTGGTGAAAGCCATGGACTTACCTGCAAAAGATGTCACTGGAAGTCTTGATCCCTATGTTGAAGTGAAGCTTGGAAACTTCAAGGGACTCACCAAGCATTTTGAGAAGAAGTCCAACCCTGAGTGGAATCAGGTCTTTGCCTTCTCGAAAGACCGGATTCAAGCCTCAGTGTTGGAGGTTATTGTCAAAGATAAGGATGTTATTTCAGATGACTTTGTGGGGAGGGTGTGGTTTGATCTGAATGAGATCCCAAGACGTGTTCCCCCAGACAGCCCTTTGGCTCCACAGTGGTACAGACTGGAAGATCGCAAGGGTGCAAAGGCCAAAGGAGAGTTAATGCTTGCAGTTTGGATGGGGACTCAAGCAGATGAGGCATTTCCTGATTCTTGGCACTCTGATGCAGCAACGGTTGGCTCTGAAGCAGTTGCAAACATAAGGTCAAAAGTTTACCTCTCTCCCAAGCTCTGGTATGTCAGGGTCAATGTGATTGAAGCGCAGGACTTGATTCCTAGTGACAAGAGCCGGTATCCTGAAGTTTTTGTGAAGGTTAATCTAGGGAGCCAGTTTATGAGAACTAGAGTGTCTCAAAGTAAAAGCATAAATCCTATGTGGAATGAGGATTTGATGTTGGTTGCTGCGGAGCCGTTTGAGGAGCCCTTGATTCTGACCGTGGAAGACAGGCTTGGACCAAACAAGGATGAGATCCTGGGAAGGTGTGTGATCCCTTTGCACATTGTGCAACGGAGGCTGGACCATAAGCCTGTGAACACCAGGTGGTTTAATCTTGAGAAGCATATGGTTGTTGAAGGGCAGAAGGAGACCAAATTCGCAAGCAAGATACACTTGAGGGTGTGCTTGGATGGTGGGTTCCATGTGTTGGATGAGTCAACTCATTACAGTAGTGATCTAAGACCAACTGCTAAGCAGCTATGGAAGCCTAGCATTGGAATTCTAGAAGTGGGGATTATAAGTGCACTAGGTCTTATGCCAATGAAGACAAGAGAGGGCAGAGGAACCACAGATGCTTATTGTGTGGCAAAATATGGGCAGAAGTGGATCCGCACTAGGACTATTGTAGATAGCTTCACTCCACAGTGGAATGAGCAGTACACTTGGGAAGTGTTTGATCCATGCACTGTTATTACCATAGGGGTCTTTGACAATGGTCGTGTACAAGGAGGAGGAGATAAAGCTGGTGAATCAAAGGATTCTAGGATAGGGAAGGTGAGAATTAGGCTATCCACACTTGAAGCTGATAGAGTTTACACGCATTCATATCCTCTTTTGGTACTTCATACTTCAGGTTTGAAGAAAACAGGAGAAGTGCAATTGGCTGTGAGGTTCACAAGCTCATCTTTCATCAATATGTTATACATGTATTCCCAGCCTTTGTTGCCAAAGATGCACTACATCCATCCTTTATCTGTGATTCAGCTGGATAGTCTGAGGCATCAGGCCATGCAGATTGTATCAATGAGGTTGAGCAGAGCTGAGCCACCCCTAAGGAAAGAGGTTATAGAATACATGCTTGATGTGGATTCGCATATGTGGAGTATGAGAAGGAGCAAAGCTAATTTCTTCAGGATAATGAAAGTTCTAGGTGGTTTGATAGCCTTTGGGAGGTGGTTTGATCAGATATGCAATTGGAAAAACCCCATCACCACCATTCTAATTCATGTCCTTTTCATAATATTGGCTCTTTACCCTGAGCTAATACTTCCCACAATCTTCTTGTACCTGTTCTTGATTGGAATCTGGAACTTCAGATGGAGGCCAAGACACCCTCCACATATGGACACTAGACTGTCTCATGCTGATGCTGCTCATCCTGATGAATTAGATGAAGAGTTTGATTCATTCCCAACTTCTCGGTCACCGGATATTGTTAGGATGAGATATGACCGTTTAAGAAGCATTGCAGGGAGAGTCCAAAGTGTTGTAGGAGACTTAGGTACACAAGGAGAAAGGTTCCGAAGTCTGCTAAGTTGGAGAGATCCAAGAGCTACAACACTCTTTCTGACATTCTGTCTCGTTGCTGCCATAGTTCTCTACGTTACTCCCTTTCAAGTTGTGTCACTTCTCACTGGCTTCTACATGCTAAGGCACCCCAGATTCCGCAGGAGACTTCCATCAGTCCCACTCAACTTCTTCAGGAGGATGCCTGCTAGATCAGACAGCATGTTGTAG 2328 0.454 MQRAPLAHSHEFALKETSPNIGAGAVTRDKLSCTYDLVEQMQYLYVRVVKAMDLPAKDVTGSLDPYVEVKLGNFKGLTKHFEKKSNPEWNQVFAFSKDRIQASVLEVIVKDKDVISDDFVGRVWFDLNEIPRRVPPDSPLAPQWYRLEDRKGAKAKGELMLAVWMGTQADEAFPDSWHSDAATVGSEAVANIRSKVYLSPKLWYVRVNVIEAQDLIPSDKSRYPEVFVKVNLGSQFMRTRVSQSKSINPMWNEDLMLVAAEPFEEPLILTVEDRLGPNKDEILGRCVIPLHIVQRRLDHKPVNTRWFNLEKHMVVEGQKETKFASKIHLRVCLDGGFHVLDESTHYSSDLRPTAKQLWKPSIGILEVGIISALGLMPMKTREGRGTTDAYCVAKYGQKWIRTRTIVDSFTPQWNEQYTWEVFDPCTVITIGVFDNGRVQGGGDKAGESKDSRIGKVRIRLSTLEADRVYTHSYPLLVLHTSGLKKTGEVQLAVRFTSSSFINMLYMYSQPLLPKMHYIHPLSVIQLDSLRHQAMQIVSMRLSRAEPPLRKEVIEYMLDVDSHMWSMRRSKANFFRIMKVLGGLIAFGRWFDQICNWKNPITTILIHVLFIILALYPELILPTIFLYLFLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDSFPTSRSPDIVRMRYDRLRSIAGRVQSVVGDLGTQGERFRSLLSWRDPRATTLFLTFCLVAAIVLYVTPFQVVSLLTGFYMLRHPRFRRRLPSVPLNFFRRMPARSDSML 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00634 775 Gene3D C2 domain 188 333 IPR035892 -
Phco9g00634 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 203 354 IPR035892 -
Phco9g00634 775 SMART C2_3c 204 302 IPR000008 -
Phco9g00634 775 SMART C2_3c 364 472 IPR000008 -
Phco9g00634 775 SMART C2_3c 43 139 IPR000008 -
Phco9g00634 775 FunFam C2 domain-containing protein 346 499 - -
Phco9g00634 775 Gene3D C2 domain 361 499 IPR035892 -
Phco9g00634 775 FunFam C2 domain-containing protein 190 333 - -
Phco9g00634 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 501 IPR035892 -
Phco9g00634 775 ProSiteProfiles C2 domain profile. 25 145 IPR000008 -
Phco9g00634 775 Pfam C2 domain 363 475 IPR000008 -
Phco9g00634 775 Pfam C2 domain 43 145 IPR000008 -
Phco9g00634 775 Pfam C2 domain 203 309 IPR000008 -
Phco9g00634 775 CDD C2D_MCTP_PRT_plant 364 492 IPR047255 -
Phco9g00634 775 Gene3D C2 domain 42 164 IPR035892 -
Phco9g00634 775 FunFam C2 domain-containing protein 38 182 - -
Phco9g00634 775 CDD C2C_MCTP_PRT_plant 204 352 IPR047258 -
Phco9g00634 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 180 IPR035892 -
Phco9g00634 775 CDD C2B_MCTP_PRT_plant 43 167 IPR047257 -
Phco9g00634 775 ProSiteProfiles C2 domain profile. 346 473 IPR000008 -
Phco9g00634 775 ProSiteProfiles C2 domain profile. 183 307 IPR000008 -
Phco9g00634 775 Pfam Plant phosphoribosyltransferase C-terminal 620 775 IPR013583 -
Phco9g00634 775 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 9 775 IPR047259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00634 Phco-Chr9 4662819 4665146 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01706 10 39540569 39542893 Phco9g00634 9 4662819 4665146 PCT