Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco10g01706 | ATGCATAAGCCAGAAGGGCCACCAGAGTTTGCTCTCAAGGAGACCTCACCTAACATAGGGGCAGGTGCAGTCATGAGGGACAAGCTCTCCTGCACCTATGACCTGGTTGAACAGATGCAGTACCTTTATGTTCGAGTGGTGAAAGCCAAGGATTTACCAGGGAAGGATGTTACTGGTGGTGTGGATCCCTATGTTGAAGTGAAGCTTGGAAACTACAAGGGCCTTACCAAGCACTTTGAGAAAAAGTCGAATCCTCAGTGGAATCATGTTTTTGCCTTCTCCAAAGAAAGTATTCAAGCTTCTGTTCTGGAGGTGGTACTAAAAGACAAAGATGTTGTTGTGGATGACTTTGTAGGGAGAGTGATGTTTGATCTGAATGAAATACCAAAACGTGTGCCACCAGATAGCCCTTTGGCTCCGCAGTGGTACAGGCTGGAAGACAGAAGAGGTGACAAAGCCAAGGGAGAGTTAATGTTGGCAGTTTGGATGGGAACTCAAGCAGATGAGGCATTTCCTGATGCATGGCATTCTGATGCAGCAACTGTTGGTCCTGAGGCTGTTGCAAACATAAGATCAAAGGTTTACCTTTCACCTAAGCTTTGGTATGTCAGGGTCAATGTTATTGAGGCTCAGGACTTGATACCAAGTGACAAAACCCGGTATCCTGAAGTTTTTGTGAAGGCCAATCTGGGAAATCAGTTTTTAAGAACTAGAGCATCTCAAAGTAAAACCATAAATCCCATGTGGAATGAGGACTTGATGTTTGTTGCTGCTGAGCCATTTGAGGAACCCTTGGTTCTGACTGCAGAAGACAGGGTTGGACCAAACAAGGATGAAATCCTGGGAAGGTGTGTCCTTCCTTTACACAATGTGCAAAGGAGGTTGGACCATAAGCCTGTGAACACAAGGTGGTTTAATCTTGAAAAACATGTGGTTGTTGAAGGGGAAAAGAAGAAAGAGCCCAAGTTCTCAAGTAGGATACACTTGAGGGTTTGCTTGGAAGGTGGCTACCATGTGCTGGATGAATCAACTCACTACAGTAGTGATCTTAGGCCAACTGCAAAGCAGCTGTGGAAGGCCAGCATTGGAGTTCTGGAAGTGGGGATTATAAGTGCACAAGGGCTGATGCCCATGAAGACAAGAGATGGTAGAGGAACCACAGATTCCTATTGTGTAGCTAAATATGGGCAGAAGTGGATCCGTACTAGGACAATTGTGGGTAGCCTTGCTCCAAGGTGGAACGAGCAATACATTTGGGAGGTTTTTGATCCATGTACTGTCATCACAGTAGGGGTTTATGATAATGGTCATTTACATGGGGGAGAGAAATCAGGTGGATCAAAGGATTCAAGAATAGGGAAGGTGAGAATTAGGCTGTCCACTCTTGAAGCTGATAGGGTGTACACACACTCTTATCCTCTTTTAGTACTGCATAATTCAGGTGTGAAGAAAATGGGAGAGGTGCAATTGGCTGTAAGGTTCACAAGCTTATCTTTGATAAACATGTTGTCTACGTATTCACAGCCATTGTTGCCAAAGATGCACTACATCTATCCGCTATCTGTGATTCAACAAGACAGTCTTAGGCATCAAGCTATCCAGATTGTGTCAATGAGGTTGAGCCGGGCTGAGCCACCACTGAGGAAAGAGGTGGTGGAATACATGCTAGATGTAGATTCACACATGTGGAGTATGAGAAGGAGCAAAGCCAATTTCTTCAGAATAACCATAGTTCTTGGTGGGTTGATAGCCTTTGGAAGGTGGTTTGATCAGATATGCAATTGGAAGAACCCCCTCACATCCATACTCATTCATATCCTTTTCATAATACTGGTTCTTTATCCAGAACTAATACTTCCGACAACTTTCCTCTATCTTTCTCTGATTGGAATTTGGAACTTCAGATGGAGGCCGAGACATCCTCCTCATATGGACACAAGACTATCTCATGCTGATGCTGCTCACCCTGATGAACTAGATGAAGAGTTTGATACATTCCCTACTTCTCGATCATCAGATATGGTTAGAATGAGGTATGATCGTTTAAGAAGCATTGCTGGGAAGGTTCAAACTGTCGTAGGGGACTTGGCCACTCAAGGAGAAAGGTTCCACAATCTACTAAGCTGGAGAGACACAAGGGCTACCACTCTTTTTGTGACATTCTGTTTCATTGCTGCACTAGTTCTGTATGTTACTCCTTTCCAAGTTGTGTCCCTTCTCATTGGCTTCTATGTTCTAAGGCACCCCAGATTCCGCCAGAAACATCCTTCAGCCCCATTCAACTACTTCAAGAGATTGCCGGCTAGAGTGGACAGCATATTGTAA | 2325 | 0.4447 | MHKPEGPPEFALKETSPNIGAGAVMRDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGGVDPYVEVKLGNYKGLTKHFEKKSNPQWNHVFAFSKESIQASVLEVVLKDKDVVVDDFVGRVMFDLNEIPKRVPPDSPLAPQWYRLEDRRGDKAKGELMLAVWMGTQADEAFPDAWHSDAATVGPEAVANIRSKVYLSPKLWYVRVNVIEAQDLIPSDKTRYPEVFVKANLGNQFLRTRASQSKTINPMWNEDLMFVAAEPFEEPLVLTAEDRVGPNKDEILGRCVLPLHNVQRRLDHKPVNTRWFNLEKHVVVEGEKKKEPKFSSRIHLRVCLEGGYHVLDESTHYSSDLRPTAKQLWKASIGVLEVGIISAQGLMPMKTRDGRGTTDSYCVAKYGQKWIRTRTIVGSLAPRWNEQYIWEVFDPCTVITVGVYDNGHLHGGEKSGGSKDSRIGKVRIRLSTLEADRVYTHSYPLLVLHNSGVKKMGEVQLAVRFTSLSLINMLSTYSQPLLPKMHYIYPLSVIQQDSLRHQAIQIVSMRLSRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRITIVLGGLIAFGRWFDQICNWKNPLTSILIHILFIILVLYPELILPTTFLYLSLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDTFPTSRSSDMVRMRYDRLRSIAGKVQTVVGDLATQGERFHNLLSWRDTRATTLFVTFCFIAALVLYVTPFQVVSLLIGFYVLRHPRFRQKHPSAPFNYFKRLPARVDSIL | 774 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco10g01706 | 774 | FunFam | C2 domain-containing protein | 36 | 180 | - | - | |
| Phco10g01706 | 774 | CDD | C2B_MCTP_PRT_plant | 41 | 165 | IPR047257 | - | |
| Phco10g01706 | 774 | ProSiteProfiles | C2 domain profile. | 23 | 143 | IPR000008 | - | |
| Phco10g01706 | 774 | FunFam | C2 domain-containing protein | 188 | 333 | - | - | |
| Phco10g01706 | 774 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 363 | 496 | IPR035892 | - | |
| Phco10g01706 | 774 | ProSiteProfiles | C2 domain profile. | 181 | 305 | IPR000008 | - | |
| Phco10g01706 | 774 | ProSiteProfiles | C2 domain profile. | 346 | 472 | IPR000008 | - | |
| Phco10g01706 | 774 | Pfam | Plant phosphoribosyltransferase C-terminal | 619 | 774 | IPR013583 | - | |
| Phco10g01706 | 774 | Gene3D | C2 domain | 361 | 498 | IPR035892 | - | |
| Phco10g01706 | 774 | CDD | C2C_MCTP_PRT_plant | 202 | 352 | IPR047258 | - | |
| Phco10g01706 | 774 | Gene3D | C2 domain | 25 | 163 | IPR035892 | - | |
| Phco10g01706 | 774 | Gene3D | C2 domain | 187 | 333 | IPR035892 | - | |
| Phco10g01706 | 774 | Pfam | C2 domain | 201 | 307 | IPR000008 | - | |
| Phco10g01706 | 774 | Pfam | C2 domain | 41 | 134 | IPR000008 | - | |
| Phco10g01706 | 774 | Pfam | C2 domain | 363 | 474 | IPR000008 | - | |
| Phco10g01706 | 774 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 201 | 354 | IPR035892 | - | |
| Phco10g01706 | 774 | PANTHER | PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 | 9 | 774 | IPR047259 | - | |
| Phco10g01706 | 774 | SMART | C2_3c | 41 | 137 | IPR000008 | - | |
| Phco10g01706 | 774 | SMART | C2_3c | 202 | 300 | IPR000008 | - | |
| Phco10g01706 | 774 | SMART | C2_3c | 364 | 471 | IPR000008 | - | |
| Phco10g01706 | 774 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 41 | 178 | IPR035892 | - | |
| Phco10g01706 | 774 | CDD | C2D_MCTP_PRT_plant | 364 | 491 | IPR047255 | - | |
| Phco10g01706 | 774 | FunFam | C2 domain-containing protein | 346 | 498 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco10g01706 | Phco-Chr10 | 39540569 | 39542893 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco10g01706 | 10 | 39540569 | 39542893 | Phco10g01706 | 10 | 39540569 | 39542893 | ECH | |
| Phco10g01706 | 10 | 39540569 | 39542893 | Phco9g00634 | 9 | 4662819 | 4665146 | PCT |