Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00628 ATGGCATTCAAGAGCTTTTGCATTCTCAGCCTCATTACTCTTGTTCTTCTGATTAGCAAAACAAATGTTAATTGCACAGAAACTGGTGCAGTTGATCCCATTATTGATGTTGCTACGCTGAATCGGGACAGTTTCCCTCCAGGTTTCATCTTTGGGGCTGGATCCTCATCATATCAGTTCGAAGGTGGTGCAAGAGAAGGTGGTAGAGGACCAAGTGTGTGGGATACTTTCACTCATAAATATCCAGAAAAGATACTGGACAAAAGCAATGGAGATGTGGCTATCGATACATATCATCGTTATAAGGAAGATGCTAAATTTATGAAGAATATGAACTTGGATTCATACAGATTCTCGATTTCTTGGTCCAGAATACTACCAAATGGAAAGCTAAGTGGAGGTATAAATCAAGAAGGAATTGACTATTACAACAATGTCATCAACGAACTATTGGCTAATGGTATAAAACCATTCGTAACTCTTTTCCATTGGGATCTTCCCCAATCTTTAGAAGATGAATATGGTGGCTTCCTAAGTCCTCTCATAATTAAGGATTTTCGGGATTATGCGGAAGTTTGCTTCAAGGAATTTGGAGATAGAGTTAAGCACTGGGCTACATTGAATGAACCTTGGACTTACAGCATTAATGGCTATGCAAATGGAACAATGGCACCAGGACGTTGTTCTACTTGGGTAAATCCAAATTGCACTGGAGGGGATTCTGGTAGGGAGCCCTATATAGTTTCACACAACCAACTACTTGCTCATGCAGCAGCTGTCCGTGTTTACAGGACCAAGTACCAGGTATCACAAAAAGTTGAGCGTGATGGAAAGCCCATTGGTATAAAGATTGCTTCTGATTGGTTATATGTTTGTCCACGAGGAATTCGTGATCTTCTATTACCATCGAAAACAGATTCCTTGACCATGGCTGCTGTTACTGGCATTAAAACAGTTGACAAAAAACAAAACTAG 975 0.4021 MAFKSFCILSLITLVLLISKTNVNCTETGAVDPIIDVATLNRDSFPPGFIFGAGSSSYQFEGGAREGGRGPSVWDTFTHKYPEKILDKSNGDVAIDTYHRYKEDAKFMKNMNLDSYRFSISWSRILPNGKLSGGINQEGIDYYNNVINELLANGIKPFVTLFHWDLPQSLEDEYGGFLSPLIIKDFRDYAEVCFKEFGDRVKHWATLNEPWTYSINGYANGTMAPGRCSTWVNPNCTGGDSGREPYIVSHNQLLAHAAAVRVYRTKYQVSQKVERDGKPIGIKIASDWLYVCPRGIRDLLLPSKTDSLTMAAVTGIKTVDKKQN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00628 324 FunFam Beta-glucosidase 11 33 285 - -
Phco9g00628 324 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 49 63 IPR033132 -
Phco9g00628 324 Gene3D Glycosidases 25 291 - -
Phco9g00628 324 PANTHER GLYCOSYL HYDROLASE 44 289 IPR001360 GO:0004553|GO:0005975
Phco9g00628 324 Pfam Glycosyl hydrolase family 1 42 290 IPR001360 GO:0004553|GO:0005975
Phco9g00628 324 SUPERFAMILY (Trans)glycosidases 34 298 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00628 Phco-Chr9 4597284 4602051 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00628 9 4597284 4602051 Phco9g00628 9 4597284 4602051 ECH
Phco10g01716 10 39678079 39679435 Phco9g00628 9 4597284 4602051 PCT