Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01716 ATGGCACGTAAAGGGTTTATACTCTTGCTGTTTTTGGCTCTTGTTAACACATTTTCATCCATTAGTGTTGCACAACACCCGGCATCTGTTATTGACGTTCTTCCTCTCAATCGCAGCAGTTTTCCCAAAAACTTTGTTTTTGGGACTGCATCTGCGTCTTACCAATACGAAGGTGCGGCAAATGAAGGTGGAAGAAAACCTAGTATCTGGGATGAATACACCCATAAACACCCAGAGAGGATAAGGGACGGAACCACTGCAGATCTAGGAGTTGACCAATATAATCGCTTTAAGAGCTGA 300 0.4333 MARKGFILLLFLALVNTFSSISVAQHPASVIDVLPLNRSSFPKNFVFGTASASYQYEGAANEGGRKPSIWDEYTHKHPERIRDGTTADLGVDQYNRFKS 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01716 99 Gene3D Glycosidases 22 99 - -
Phco10g01716 99 PANTHER GLYCOSYL HYDROLASE 40 98 IPR001360 GO:0004553|GO:0005975
Phco10g01716 99 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 45 59 IPR033132 -
Phco10g01716 99 Pfam Glycosyl hydrolase family 1 39 98 IPR001360 GO:0004553|GO:0005975
Phco10g01716 99 SUPERFAMILY (Trans)glycosidases 30 98 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01716 Phco-Chr10 39678079 39679435 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01716 10 39678079 39679435 Phco10g01716 10 39678079 39679435 ECH
Phco10g01716 10 39678079 39679435 Phco9g00628 9 4597284 4602051 PCT