Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00397 ATGGGTCGCCGGCTTCTCTTTCTCATCTTTCTCACCCTTGTCGCATTAGCTTTCCTCTCAGAAGTTCAATCAGCATCGTTCAAGATTGTGAACAAGTGTCGCCACACGGTATGGCCGGGATTACTCTCCGGCGCCACCTCGCCGCCGCTTCCTACCACCGGATTCGCTCTCCAGAGCGGAGAATCGAAGACATTAAAATTCCCGAAATCTTGGTCGGGTCGGATATGGGCACGGACCCTCTGCGGTCGAGACGCCGACGGAAAGTTCTCTTGCGCCACCGCGGACTGCGGCTCCGGCAAAGTAGAGTGCGTCGGCGGTGCCAAGCCCCCGGCGACATTAGCAGAGTTCACCCTGAACGGTGCCGACGGGTTGGACTTCTACGACGTGAGTTTGGTCGACGGTTACAACCTTCCGATGCTGATCGTGGCGAAGGACGGCACCAGGGGCGGGTGCAGCGCCACGGGATGTCTCGTCGACCTCAACGGCGGGTGTCCGGCGGAGCTGAGGGTGGCGCGCATGAACGGCAGCCGCGGGAGCTTGGCCTGCCGGAGCGCGTGCGAGGCCTTCGGTGATCCTCGTTTTTGCTGCAGCGGCGCGTACTCGACGCCTGACACGTGTGGTCCTTCTCCTTATTCGCTTTTCTTCAAGCACGCTTGCCCACGCGCGTATAGCTACGCGTATGATGACAAGACCAGCACCTACACATGTGCCTCCGCCAACTATTTGATCATTTTCTGCCCTTTACCCTATTCCAGCCAAAAGCTTTTGGGAGCACGTAAAGATGGGGCACAACTTCCTCTGGTAAACAAAACTATGATGTACTTATCAAGGCTACAGTCCAGTGGTTCTTCACCATCAGTTGTGGTTCAAACGCAGAGTATAGCTTATGTTGCCTCTCTTTTAGTGGCTCTGTTCCTGTTCCTCCCTCTCTAG 933 0.5659 MGRRLLFLIFLTLVALAFLSEVQSASFKIVNKCRHTVWPGLLSGATSPPLPTTGFALQSGESKTLKFPKSWSGRIWARTLCGRDADGKFSCATADCGSGKVECVGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKDGTRGGCSATGCLVDLNGGCPAELRVARMNGSRGSLACRSACEAFGDPRFCCSGAYSTPDTCGPSPYSLFFKHACPRAYSYAYDDKTSTYTCASANYLIIFCPLPYSSQKLLGARKDGAQLPLVNKTMMYLSRLQSSGSSPSVVVQTQSIAYVASLLVALFLFLPL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00397 310 FunFam THAUMATIN-LIKE PROTEIN 1 25 247 - -
Phco9g00397 310 SUPERFAMILY Osmotin, thaumatin-like protein 26 247 IPR037176 -
Phco9g00397 310 CDD TLP-PA 26 246 - -
Phco9g00397 310 Gene3D Thaumatin 25 247 IPR037176 -
Phco9g00397 310 PANTHER OS03G0233200 PROTEIN 10 247 IPR001938 -
Phco9g00397 310 Pfam Thaumatin family 31 247 IPR001938 -
Phco9g00397 310 PIRSF PR5 1 301 IPR001938 -
Phco9g00397 310 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
Phco9g00397 310 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Phco9g00397 310 SMART tha2 27 247 IPR001938 -
Phco9g00397 310 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Phco9g00397 310 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Phco9g00397 310 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Phco9g00397 310 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Phco9g00397 310 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00397 Phco-Chr9 2791698 2793581 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00397 9 2791698 2793581 Phco9g00397 9 2791698 2793581 ECH
Phco9g00397 9 2791698 2793581 Phco4g00855 4 6629345 6631029 ECH