Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00217 ATGCTCCTACCTCTGATTTTTCTGTTAATTCGAAGAGAGGATTTTTCACGACTCGAAACGACGTCGCATAGGCACTTTGCGCTTGATTGCAATATGCAATGGCTGAACGTTAGGGAAGCCTGTGCAATGCGACCAACGTCGTTTGGAAGAAAAAGGCATTATCGAGAGGATTTTTCGCATGGAAGAACCGCAATATTGACTAATCATGATGTTCAAGAGAACATGGTATCACTCAAATCTGGAAAGAAATTTGATGAACATTCTATGATTCAGAAAGCTGACATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATCTAAACCGAGCTCTCATGGGATCGAAGACCAAAGAATTCTCTGATGAAAACTCTCGCTTAGGGGAGGCTAATCAGTATTGTACTGTTGAGGCTGATGGGTCTTCTTCTCCTGGGAGCAGAGCTTGTGAAAGATTGAAGAAGCATCCTGTCAATGAAAGCAGTCACAAGCCTAGTATTTCTTCAAATCATGATTCTCGGTCTGAAAATGTTGAGAATGGACAAGCCTTATCTGGGAAGTATCAGGATTCAAAGTGTTTAGAAAGTCTTGATGATATCACTTCTTGTATCAGTAGGACCAGTAATGCTAATTTAGCGAGTGGTAGCCAACAAATAAATACAGACAGAACAAATGTATCTTGTAGTTCGACTTTAGTTAGTCACTTAGAGGCAGAAGGATCTAGAAACGGGCCATCTGTTGACATGTCTGGTTTGTCAGAAGGCTGTATGGAAAATGTAGATTCATCATTTACCAAAGAGAGAGTAGCTATTATATCTGCTGTTGAAAAACCTGTGACAGATAAGGAGAACCTAAATAATGGAACAGCCAAAGTTTCAGTGGAAATATGTCCGAAGTCAGAAGCAGATATGGGAAATAATGTTGATATTGCTATAGCTGAAGATCATAAATATTCAGCCCATGATGGACTGCATGCAAAGGTTGATAAGCTGATTAAATCATCTGGCAGGTCTGAACCTCTATCAGAAGATGAGGGTCATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAAGATCTACTTGCCATATGTAGTCGGTGTAGTGATGGTGCAGAGCACACCTACTGCATGCGGGAAATGCTTGTCAAACTCCCTGAAGGTGATTGGTTGTGTGAAGAATGCAAGTGTGCAGAGGAGACGGCAAATCGAAGGCTAGTTATTGAAGAAAAAAAACTTCATAAAGTTATTTCAGCTTCACAAATTTCCGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCAAAAAGGCAAGCTCTTGAATCAAGCACAGGGTCACCGAAGGCATCAAGCCCAAAGAGAATAGTCTCACTGTCACGGGAATCTTCTCTCAAGAGCATGGATAAAGGAAAGATGAAATCTGGGCAACAGGTCCCCGTGCGTAACCACCTTGGCGGTGATGATGTAGACCTTGCACGTACTCTTTCGACTGGCCCTCGGAGTCAAAATCCAAGGAGTACGTTGTTGAAGTCCAATTCATTCAACAACTTCAATTCCAGGCCTAGAATCAAACTTGTGGATGAAGTTGTTCCCCAGAAGCAGAAAGGGGGTGTCGAACATATTTCTAGGAATCTTGAGACACCTTCTGGGATGATAAGCAAATCAATGTCATTTAAATCCTCACACTTGGGGCGGTCAAATACTAATGAATCAAAAGTTAAATCTAGTTTTTCTAAACCTGGAATTGTTCAGGATTTGAAAGCATTAAGACATACAAAAGAACCGGGTTCACTTGACAAGAAATTTCAACCTAAGATTGATCGACCTGTCATTCATTCAACTATGGTTAGTTCTGTTTCCACATCAAAAGTTGATCATAAGCTTGCTCCTCATGGTGAAACTGCTAAACCTTATACAGTTAACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAAGTATATTCATTATCAAAGTCTATGAATAATACAGGCAGTAGAAGTCCAGAACCTCAAGTTAGTTCAGATAAAACATCAACCAGTGTCAATGAAACTCAACAGGATAGGCTGCCTCGATCACAGGAAACTGTTAATCAGGTTGACAGAACCAAAGATAGTTCTAGTGATCATGTGAGGTCAGGTGTTACTAATGCTTCAAAAAGTTCATTCTGTCGTAAATGTAAAGATTTTGGCCATGCTACAGAAGGTTGCTCAATTAGTGGTACCCAAGAATTTGTTGCCGAAGCATCAGTCACTACTAGTAGTTCAAAAGAGGAGATGCATAAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGGAGGCCTGAAATACACAAGAAGAAAGAAGGTCCTGATGAAACTAATGAGTTTCCTACATCAAGCACTGGTTTCAAACGTGAAGTTACTTCTCAAAACCAAGTGTTGGTTTCCAGCACATTAAAGAATAGTATATATGCTGAAGAAACGAATGTGAAGCAGGAAATTGTTGAGAGTTCTTCATTTGAAACCTCTAAATGTCCATCTGCTAATGATCTGAAGCAACTTAAATTCTGCCAAACTGATATTTGCTCTCAGCTGAGAAAGTCAGATTTTGTTGGTCTTACTTCTGGAGAGCCTGTGGTGAGAGACTTGCCCAATAATGGCATGGTGATCTCAAGTGTTCTTTCAAAGATGTCAGTCATTCCGGAGTATGAGTACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGACTTGTATGCTGGAATTCAGGCACATTTATCCGCATGTGCTTCTCCTAAGGTTATTGAGACAGTAAAGAATTTTTCACCTGAAGTTTCCCTAAATGAAGTTTCTCGATTGAGCATATGGCCTTCACAATTTCATCAAAGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAAAGACACTGAAAGTTACGAGAGACACTACAAGGGTCTATTGGATCACATGATTAAAAATGATTTGGCACTTAGGGGAATGTTTGGTGGCGTGGAACTTCTCATATTTGCCTCCAATCAGCTTCCGGAAGACTCACAACGTTGGAATATGTTATTTTTCCTATGGGGTACATTTAGAGGGAGGAGGATAAATCATTCAGATTCCACAAAAAGTGTATGTATTCCTAGTTTGAATGTGATGCCAAATGAGAAGGATTTCCCGTCTGCTGTCATGACTTTGTCTGAAAGTTGGTGTTCACCAAAACGTGTCGATGAAGAGTCCATTGACCAAGGTAACAATATGGCATGTAGGAATTTTGATAGTAAAGGAACTGTGTTTGGCCAGACACATTTGGAGTTGCAAGTAAAGTTAGAGAGACTAGATTCTAGTGTCAACACCAAATCTACATCAGGGATTCTGATCACCAGTACTCAATTTTGTCAAGAAATGAATTCTACGGGTTCATCCCGGGGAGATAGTGCACCGGAGCATCGACAATGCATACAGTCTAAACCTCCTGAAGTAATGGGAACTAGTGTAAGTCGAAGGATTGTGGAAACAAAAACTAATCCTGATATTTCTGGTAAGCAAGAGACCTCTTTGTCTTCAGAGATCCCTTCTGTCGATTGCCAAATAGACACTGCAAGTAATATCAATAAGGATAAAATTTTGGAGAGAACAGTATGTGATGAGAATCAGCGAAGGCCTAAAAGGAAACAGTTAGAAAATGGTCTCAATATTAACGAGGAGGCAACGCTTCAGGGAGACCTGGATTTGAAAGGGGCCAACTGTCAGGTACCTAATGATAAAAAAATTAAGCATATAGATCTATCAGACACAGTTGTGGAGGCTTCTGCAGTTAGTTGTCAGAAACGTCCTCTGAATGAAGTAAATGGCAAGTTGGAAGACGGAGAAAGTAGCAAGAAGCTGCAAAAAAGCTTGGGTGGAGTTTTTGAATGTAACGATTCTGCTGGAGCCAGGGTCTCTTTCAATGGTAGTTTTGCATCCTTTGTGAACGATCTTGGTTCCTGTTCTTCGGTGGGCAAAGGGTGCAAAGAAGCTTGCGATGAGAAGATCATCCACGAGGACTTAGGAACGATGGAAAGAACCTTTTTTCCTGTTGATAATCGTAATAAACTTAACTCGGGGATGGTGGTGAACAGGGAGTCACTTAATGGGGCTCGTGAGTACGTGGACCAATTTGAAGTTGGGATTCCAAATTTGGAGCTTGCTTTGGGGGGTGAAACGAAACCGTCACACAAGGGTATGCTGCCATTCTTTGTTGGTGCAGTTGACAAGAAAATTAACCCGGAAAAGACTCCAGATATTGAGCGAGACGATGAGAACGTTGCTGCATCTCTTTCCTTGTCACTATCCTTTCCATCTTCAAGCAAAGAACACATCAAACCAGTTACAAAAAACGAGCCTTTGCCCACCGATGGGCATAACGCCAAGTCGTCGTTTCTTCTTTTTGGGAGATTCACCGACAAATAA 4515 0.4113 MLLPLIFLLIRREDFSRLETTSHRHFALDCNMQWLNVREACAMRPTSFGRKRHYREDFSHGRTAILTNHDVQENMVSLKSGKKFDEHSMIQKADMRLESGTCNVCSAPCSSCMHLNRALMGSKTKEFSDENSRLGEANQYCTVEADGSSSPGSRACERLKKHPVNESSHKPSISSNHDSRSENVENGQALSGKYQDSKCLESLDDITSCISRTSNANLASGSQQINTDRTNVSCSSTLVSHLEAEGSRNGPSVDMSGLSEGCMENVDSSFTKERVAIISAVEKPVTDKENLNNGTAKVSVEICPKSEADMGNNVDIAIAEDHKYSAHDGLHAKVDKLIKSSGRSEPLSEDEGHESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLVKLPEGDWLCEECKCAEETANRRLVIEEKKLHKVISASQISGKRPSQSMEIATAAKRQALESSTGSPKASSPKRIVSLSRESSLKSMDKGKMKSGQQVPVRNHLGGDDVDLARTLSTGPRSQNPRSTLLKSNSFNNFNSRPRIKLVDEVVPQKQKGGVEHISRNLETPSGMISKSMSFKSSHLGRSNTNESKVKSSFSKPGIVQDLKALRHTKEPGSLDKKFQPKIDRPVIHSTMVSSVSTSKVDHKLAPHGETAKPYTVNNNREFKVNQDGKVYSLSKSMNNTGSRSPEPQVSSDKTSTSVNETQQDRLPRSQETVNQVDRTKDSSSDHVRSGVTNASKSSFCRKCKDFGHATEGCSISGTQEFVAEASVTTSSSKEEMHKGNRLKAAIQAALLRRPEIHKKKEGPDETNEFPTSSTGFKREVTSQNQVLVSSTLKNSIYAEETNVKQEIVESSSFETSKCPSANDLKQLKFCQTDICSQLRKSDFVGLTSGEPVVRDLPNNGMVISSVLSKMSVIPEYEYIWQGVFEVHRNGKPPDLYAGIQAHLSACASPKVIETVKNFSPEVSLNEVSRLSIWPSQFHQSGAKEDNIALYFFAKDTESYERHYKGLLDHMIKNDLALRGMFGGVELLIFASNQLPEDSQRWNMLFFLWGTFRGRRINHSDSTKSVCIPSLNVMPNEKDFPSAVMTLSESWCSPKRVDEESIDQGNNMACRNFDSKGTVFGQTHLELQVKLERLDSSVNTKSTSGILITSTQFCQEMNSTGSSRGDSAPEHRQCIQSKPPEVMGTSVSRRIVETKTNPDISGKQETSLSSEIPSVDCQIDTASNINKDKILERTVCDENQRRPKRKQLENGLNINEEATLQGDLDLKGANCQVPNDKKIKHIDLSDTVVEASAVSCQKRPLNEVNGKLEDGESSKKLQKSLGGVFECNDSAGARVSFNGSFASFVNDLGSCSSVGKGCKEACDEKIIHEDLGTMERTFFPVDNRNKLNSGMVVNRESLNGAREYVDQFEVGIPNLELALGGETKPSHKGMLPFFVGAVDKKINPEKTPDIERDDENVAASLSLSLSFPSSSKEHIKPVTKNEPLPTDGHNAKSSFLLFGRFTDK 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00217 1504 MobiDBLite consensus disorder prediction 1471 1491 - -
Phco9g00217 1504 MobiDBLite consensus disorder prediction 168 188 - -
Phco9g00217 1504 SMART PHD_3 364 411 IPR001965 -
Phco9g00217 1504 MobiDBLite consensus disorder prediction 436 480 - -
Phco9g00217 1504 MobiDBLite consensus disorder prediction 674 735 - -
Phco9g00217 1504 SUPERFAMILY FYVE/PHD zinc finger 353 416 IPR011011 -
Phco9g00217 1504 MobiDBLite consensus disorder prediction 512 532 - -
Phco9g00217 1504 MobiDBLite consensus disorder prediction 143 188 - -
Phco9g00217 1504 MobiDBLite consensus disorder prediction 674 714 - -
Phco9g00217 1504 MobiDBLite consensus disorder prediction 436 532 - -
Phco9g00217 1504 PANTHER - 362 1084 - -
Phco9g00217 1504 MobiDBLite consensus disorder prediction 566 595 - -
Phco9g00217 1504 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 294 422 IPR013083 -
Phco9g00217 1504 MobiDBLite consensus disorder prediction 1157 1185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00217 Phco-Chr9 1420775 1430818 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00217 9 1420775 1430818 Phco4g00143 4 845551 852646 ECH
Phco9g00217 9 1420775 1430818 Phco9g00217 9 1420775 1430818 ECH