Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00143 ATGACTCAGAACACTGATATGAGAATTGAATCGGGAACTTGCAATGTGTGTTCTGCTCCTTGTTCATCTTGCATGCATCTCAATCATGCTCTCATGGGGTCAAAGGCTGAAGAGTTTTCTGATGAAAACTGTCGCATAGGAGCGGCTATTGATCAGTACTCTATGGATGAGGACAATTCATACTCTCTCAGGAGCAGAGCTTGTGAAAGCTCACAACACACTGTCAGTGAAGCAAGTAACATGCAGAGTGTTAATTCAAGTCATGACGCACTGTCTGAAAATGCCAAGAGTAGACAGATCATTCTGAATAAGTATCAGGATTCCAAGCATTTAGAAGGTCATGATGACAACACTTCTTGTATTAGTAGAGCCAGTGATACTAATTCAGTGAATGTTGGCCATCAAAGGAATGAAGAGCGAATAATAATGCATGTGGAGAGGGATTCATGTTCTCGTGTGTCAGAGAAATTGTCTGAATGCACCACTGAGAATTTTAGTTCATCATGTACCAAAGAGAGGGAACCTGTTGTTTCTGGTGAGAAATGTATTGTGGTTAAGGATGGTATTATTGAGAGTACTTCCAACATTTCACTAAAAGTATGCCCAAAGTTAGAAGCAGAAACTGAGGTATGTGAAGCTAACAATGAAGATCCTAAATGTTCAGTTCAAGATGGACAGTGCGAGAAAGCTGCACAGCTGGTTAGATCGTCTGCAAAGCAGGAAACTCAATCTGAAGATGAGAGTGATGAATCAGATGTTGTTGAACATGATGTAAAGGTGTGTGACATCTGTGGAGATGCTGGTCGGGAGGATCTACTTGCTATATGTAGTAGGTGCAGTGACGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTTGAGAAAGTCCCTGAAGGGGATTGGTTGTGTGAAGAATGCAAAGACGCAGAGGGGAATGAAAATAAAAAACCGGATGTTGAAGACAAGAAAATTGTTGAAGTTAGTTCAACCTCACAAGTTTCTGGCAAAAGACTTTCTGATAACATTGAAGTAGCTCCAGCAGCAAAAAGACAAGCTCTTGAATCAAGCACAGGGTCACCAAAGACGTCAAGCCCCAAGAGATTAGTTCCACTGTCCAAAGAATCTTCATTTAAGAGCTTAAATAAATCTAAGGTGAAGACTGGTCTTCCGATACCTAGTCGAAACAACTCTGGTGGTAGTGACACAGAGACTGCTTGCTCTCCTTCCATTGGTCCCCGGGGTCAAACTCCAAAGGGTATGTTGGTGAAATCTAATTCATTTAACAATGTAAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGTTCCCGCAAAACCAAAAGGGGGTAATGAACATGCTTCAAAGAACATGGAGATGCCTGCTCGGATGACTGGCAAATCGACATTATTCAAATCTCAAAGTTTGGGGCGAACAAATGCAACTGAATCAAAAGTTAAAATGCTTTCACCCAAGTCTGCAGCTATGCAGGATTTGAAAGGATCTAGACATTTAAAAGAATCAGGTGCACTTGACAGGAAATTTCCATCTAGGATTGATCGGCCTGTGGTTAGTTCTGTTGTTTCCAGTCCTAAGGGTGATCAAAGGCTCACACCTCGTGCTGAATCCAGTAAACCTTCCGCAATGAACAACAATCGAGAGGTGAAGGTTATTCAGGACGGAAAAGCAAGTGCATTATCAAGGTCAATGAGCAGTATAAACCGAAAAAGTTTGGAGCCTCAAGTTATTTCAGAGAGAACATCAACCCGTGTTGATGAAGCTCAACAGGATGTGCTGCCTCGAACACGGGAGACAGCTAATCAGATTGAGAAAAGCAGAGACAGTTCTATTGACCGTGTAAGGCCAGCTGTTCCTACTTCTTCAAAAGGTCCATTCTGTCAAAAGTGTAAGGAATTTGGCCATGCCATTGAATGTTGCACCGCTGGCACTACACAAGAATCTGGTGTTGAAATATCTGTAACTACCTCAAGTAGTTCAAAAGATGAGATGCATAAAGGCAATATATTGAAAGCTGCTATCCAGGCTGCTTTACTTAGAAGACCTGAAATTTACAAAAAGAAAGAAGTATCTAACCAAACCGATGAGGTTTCTACCTCAGGCACAGATTTGAATTGTGAAGTGACTTCAAATGACCCCATCTTGGTTTCCAGCACACCGAAGAATAGTATGTCTGTTGAAGAAACCCCTGAACAACAGGAAATCCTTGAGAACTCTACCTCAGATTCTTCCAAATGTTCATCTGCCAATGATTTTAAGCAACTCAAGTCTTGTCCGACTGATTTTCGATCCCAACCAAGAAAGTTGGGTTCGATATGTCTTGGAGCTGGAAAACCTGTAGTGAGAGACATGTCTGATAAAGCCATGACATTGTCGATTGTTCCTTCGAAGACGTTGGCCTTTCCTGAATACGAATACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGATTTATGTACCGGACTTCAGGCGCATTTATCCTCTTGTGCTTCTCCTAAGGTTCTTGGAGCAGTGAACAAGTTTCTACCTAAGGTTTCTTTCAATGAAGCTTCTCGCATGAGCTTGTGGCCTTCACAATTTCATCATGGTGGTGTTAGTGAAGATAATATAGCTCTATACTTCTTTGCCAGTGATGTTGAAAGTTATGAGAAACACTACAAGGGTCTTTTGGATCGCATGATTAGAAATGATTTAGCACTTAAAGGAAACTTTGAGGATGTTGAACTGCTGATATTCCCTTCCAACCAGCTTCCTGAAAATTCACAGCGCTGGAATATGTTGTTTTTCTTATGGGGCATATTTAGGGGGAGGAAGATGAATCATTCAGATTCTACAAAAAAGATTTGTATTCCCAGTTTGAATGGAATGCCGGTTGAGGAGAAATCTTCATCTGTTGTTTTGATGGTACCTGAGACACACTGTTCGCCAAAGTGCAAGGATGAAGAAACAATTGATCGGTATAGAGCATGCAATGCACTTTTCCCGTCCACATCCACAGACCAACATCCAACCACCAGAGGTAGGAATGTTGATGTCAACGACCAGAGACATTTGGATTTACAAGTAAACACAGAGAAGCTAGATGGTAGGATTGGATCAAAAAGGGTTCCAACTAGCACGACTCTGTTATGTCAAGAAATGAACTCCACTGATTCGTCCATGAAAGCTAGTGTAGCTGAACAGGGACAGTGCAAAGAGTCTAAACCTCCTGAAGCTATGGGAAAAAGTGCAAGCAGCAGTATTGTGGAAACAAAAACTGATTCTGATGTTTTTGTCAAAGAAGAGAAAACCTTGTCTGTGATTCCTTCTGAAAAAGGTGCCGCTTGCAATATTACTAAGGATACAATATCTGAGAAAATAAACAGTGATGAAGACCAGCAAAGGCCTAAAGAGAGACAAAAAGGGTATCGTCACTACAGTATTGATTTGGAGGCAAATATTGACAATGAAGAAACAGGTGACGCAAGCGATTTAAGTAAGGATAAAAGCTCAATAACAATTATTGGTAGTGAAGATAAGAAAGGGCCTATGGGGAAACAGAAAAAGGATCATTATATTGACTTAGAGGTAACACTTGAGGATGAAGGAACATATTTTGTAAACAATATATGTGAGGATAAAATTTCAGAAAAAATGGATGTTGAGGAAGACTGGCGATTTCCGAAGAGGAAACGGAAAGATGATCACTATATTGACTTGGAGGCAACTTTTCAGGGAGACCCAAGTGCAGAAGGGATCAACTGTCAGCTACCTAATGATAAAGTTAAACAAGTAGATATTTCTGACACAATTATGCAGGGTTCTTCTGTCAGTTATCAGAAAATGCCTTGGAGCCAGGGCAATGTCAAGTTAGAAGACACAGAAAGTTCTGGCAAGAAGCTTAAGACAGGTTTCAGTGGGATCTATGGTTCTGGAGGTAGAGACTCTTTTAATGACAGTATTACATCTCTTGGAAATGATCTTGGTTCCGGTTCTTCAGTTGAGGACAAAGGATGTGAGGAAGCTTGTGATGAGAAAATTATCAGGGAGGACTTGGGAACGATGGAAAGAACCTTCTTTCCAGTGGGCATACACAATATTAGCAACTCAGTATCTGTGCTGAATAGCTTGTCAACCAAAGGGGTTGTTGGTGAGTATGATAAAGGATTCCAAGATGGGATTCCCAATCTAGAGCTCGCTTTAGGGGGCAAAACGAAAGCACCGCCCACACCATCTGCGCCTAAGGGTATGCTGCCTTTCTTAGTCGGGCCAGTAGAGAGGCAAAATAACCGCCCAGATAGCATGGGAGAAGGGCAGGAGGATGATGGTGTTGCTGCATCTCTTTCCCTCTCTCTATCCTTTCCATCTCCAAACAAGGAACACATAAAACCTGCAGAGCTTTTACCTGATGGGCAGCGTATGAACAACTCGTTTTTCCTTTTTGGGAGAAAATAA 4467 0.4166 MTQNTDMRIESGTCNVCSAPCSSCMHLNHALMGSKAEEFSDENCRIGAAIDQYSMDEDNSYSLRSRACESSQHTVSEASNMQSVNSSHDALSENAKSRQIILNKYQDSKHLEGHDDNTSCISRASDTNSVNVGHQRNEERIIMHVERDSCSRVSEKLSECTTENFSSSCTKEREPVVSGEKCIVVKDGIIESTSNISLKVCPKLEAETEVCEANNEDPKCSVQDGQCEKAAQLVRSSAKQETQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEGNENKKPDVEDKKIVEVSSTSQVSGKRLSDNIEVAPAAKRQALESSTGSPKTSSPKRLVPLSKESSFKSLNKSKVKTGLPIPSRNNSGGSDTETACSPSIGPRGQTPKGMLVKSNSFNNVNSKPRVKLVDEVVPAKPKGGNEHASKNMEMPARMTGKSTLFKSQSLGRTNATESKVKMLSPKSAAMQDLKGSRHLKESGALDRKFPSRIDRPVVSSVVSSPKGDQRLTPRAESSKPSAMNNNREVKVIQDGKASALSRSMSSINRKSLEPQVISERTSTRVDEAQQDVLPRTRETANQIEKSRDSSIDRVRPAVPTSSKGPFCQKCKEFGHAIECCTAGTTQESGVEISVTTSSSSKDEMHKGNILKAAIQAALLRRPEIYKKKEVSNQTDEVSTSGTDLNCEVTSNDPILVSSTPKNSMSVEETPEQQEILENSTSDSSKCSSANDFKQLKSCPTDFRSQPRKLGSICLGAGKPVVRDMSDKAMTLSIVPSKTLAFPEYEYIWQGVFEVHRNGKPPDLCTGLQAHLSSCASPKVLGAVNKFLPKVSFNEASRMSLWPSQFHHGGVSEDNIALYFFASDVESYEKHYKGLLDRMIRNDLALKGNFEDVELLIFPSNQLPENSQRWNMLFFLWGIFRGRKMNHSDSTKKICIPSLNGMPVEEKSSSVVLMVPETHCSPKCKDEETIDRYRACNALFPSTSTDQHPTTRGRNVDVNDQRHLDLQVNTEKLDGRIGSKRVPTSTTLLCQEMNSTDSSMKASVAEQGQCKESKPPEAMGKSASSSIVETKTDSDVFVKEEKTLSVIPSEKGAACNITKDTISEKINSDEDQQRPKERQKGYRHYSIDLEANIDNEETGDASDLSKDKSSITIIGSEDKKGPMGKQKKDHYIDLEVTLEDEGTYFVNNICEDKISEKMDVEEDWRFPKRKRKDDHYIDLEATFQGDPSAEGINCQLPNDKVKQVDISDTIMQGSSVSYQKMPWSQGNVKLEDTESSGKKLKTGFSGIYGSGGRDSFNDSITSLGNDLGSGSSVEDKGCEEACDEKIIREDLGTMERTFFPVGIHNISNSVSVLNSLSTKGVVGEYDKGFQDGIPNLELALGGKTKAPPTPSAPKGMLPFLVGPVERQNNRPDSMGEGQEDDGVAASLSLSLSFPSPNKEHIKPAELLPDGQRMNNSFFLFGRK 1488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00143 1488 MobiDBLite consensus disorder prediction 352 411 - -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 700 755 - -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 1409 1452 - -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 310 325 - -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 477 553 - -
Phco4g00143 1488 SUPERFAMILY FYVE/PHD zinc finger 247 308 IPR011011 -
Phco4g00143 1488 ProSiteProfiles Zinc finger PHD-type profile. 258 309 IPR019787 -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 1128 1169 - -
Phco4g00143 1488 PANTHER - 258 974 - -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 528 553 - -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 1073 1092 - -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 111 132 - -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 603 627 - -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 310 418 - -
Phco4g00143 1488 SMART PHD_3 260 307 IPR001965 -
Phco4g00143 1488 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 242 333 IPR013083 -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 1128 1156 - -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 603 618 - -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 695 755 - -
Phco4g00143 1488 MobiDBLite consensus disorder prediction 499 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00143 Phco-Chr4 845551 852646 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00217 9 1420775 1430818 Phco4g00143 4 845551 852646 ECH
Phco4g00143 4 845551 852646 Phco4g00143 4 845551 852646 ECH