Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02832 ATGAACGCGGAACCACCGGCAGCGCTCCTCATGTCGGTTTCCTGCATCTCCGACTACGACCTCCACTGCGACGAGGAAACCTCCGGCATCCTCTCCGGAGAGTCGCCGGAATGCTCGTCCGACATAGATTCCTCTCCCTCGCCGCCATCGCCACCAACGTCCACGGAGGACTGTTCAATCGCTAGTTTCATCGAACACGAGCGCAACTTCATCCCCGGATTCGACTACCTCTCTAGGTTCCAATCTCGCTCCCTCGACGCCGACGCCAGAGAGGAATCCGTTGCGTGGATTCTCAAGGTGCACGCGTATTATGGCTTTCAACCTTTGACGGCGTACCTTGCCGTCAATTATATGGATCGGTTTATGGATTCTCGCCAGTTACCGCAAACAAATGGGTGGCCTCTGCAACTTCTATCTGTTGCATGTTTGTCTTTGGCAGCAAAGATGGAGGAACCTCTGGTTCCATCTCTTTTGGACCTTCAGATAGAAGGTGCCAAGTACATGTTTGAGCCGAGAACAATTCGTAGAATGGAGCTACTTGTTCTGGGTGTCTTGGATTGGAGGCTAAGATCAGTAACCCCACTTTGTTTCCTCGCTTTCTTTGCGTGCAAAGTAGATTCAACAGGAACTTTTACCACGTTCCTCATTTCCCAGGCCACGGAAATCATCGTGGCTAATATTCAAGAGGCTAGCTTTCTTGCTTACAGGCCGTCATGCATTGCTGCCGCAGCCATACTTTCTGCGGCTAAGGAAATTCCTAATTGGGCTGCCCTTAAGCCTGAGCATGCTGAGTCATGGTGCGAGGGCCTAAGAAAAGAAAAAATTATAGGATGCTACCAGTTGATGCAAGAACTTGTGGTTAACAATAACCGTAGAAAACTCCCTATAGTGTTGCCGCAGCTGCGAGTAACAACTCGGACTCGAATGATGTCAAGTGTCTCATCATTCTCATCGTCATCCTCTTCATCTTCCTTCTGCTTGTCTTGTAAGAGGAGGAAATTAAATAACTGTTTGTGGGTAGAGGACAAAGGGAACTCCGAGTGA 1044 0.4952 MNAEPPAALLMSVSCISDYDLHCDEETSGILSGESPECSSDIDSSPSPPSPPTSTEDCSIASFIEHERNFIPGFDYLSRFQSRSLDADAREESVAWILKVHAYYGFQPLTAYLAVNYMDRFMDSRQLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQIEGAKYMFEPRTIRRMELLVLGVLDWRLRSVTPLCFLAFFACKVDSTGTFTTFLISQATEIIVANIQEASFLAYRPSCIAAAAILSAAKEIPNWAALKPEHAESWCEGLRKEKIIGCYQLMQELVVNNNRRKLPIVLPQLRVTTRTRMMSSVSSFSSSSSSSSFCLSCKRRKLNNCLWVEDKGNSE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02832 347 CDD CYCLIN_AtCycD-like_rpt1 89 187 - -
Phco8g02832 347 SUPERFAMILY Cyclin-like 174 287 IPR036915 -
Phco8g02832 347 SMART Cyclin_C_2 192 325 IPR004367 -
Phco8g02832 347 FunFam D2/4-type cyclin 73 190 - -
Phco8g02832 347 Gene3D - 62 253 - -
Phco8g02832 347 MobiDBLite consensus disorder prediction 30 56 - -
Phco8g02832 347 SUPERFAMILY Cyclin-like 60 189 IPR036915 -
Phco8g02832 347 Pfam Cyclin, C-terminal domain 192 302 IPR004367 -
Phco8g02832 347 SMART cyclin_7 95 183 IPR013763 -
Phco8g02832 347 Pfam Cyclin, N-terminal domain 61 189 IPR006671 -
Phco8g02832 347 PANTHER CYCLINS 58 290 IPR039361 -
Phco8g02832 347 Gene3D - 73 190 - -
Phco8g02832 347 ProSitePatterns Cyclins signature. 90 121 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02832 Phco-Chr8 41708482 41711914 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01504 4 13685360 13691117 Phco8g02832 8 41708482 41711914 PCT