Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01504 ATGGTTACAGGCATCGCATATTTATACTCAAACAAACAAACATATGAAGAGCATGCCTGTATCTTTCATCAACAGATACACTCTCTCCCTAAACTCGCCACCGCAACTTCCACTTCCGGCGACTTCTCCGATCGTTTGCCGGCGACACCTCATCGGAAGCTATGGCCACGGCCACAGAATGAGTATCCGCCGATCGCCATGTCGGTCTCCTGCTCCAACTGCCTCCCCGATTCCTTACTTCTCTGCGGCGAGGACTCCTCCGGAGTCTTGTCAGGAGAATCGCCGGAATGTTCCTCCGACCTCGATTCCTGGCCGCCATCGGAGGAGGATTCCATCGCCGGATTCATCGAAGACGAACGACACTTCGTTCCCGGATTCGAATACCTCAACAGGTTCCAATCTCGCTCTCTCGACGCCTCCGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTCCAGGCTTGTTACGGTTTTCAACCGCTCACGGCTTATCTTTCCGTTAATTACATGGATCGATTCCTGAATTCTAGAACGTTGCCGCAAACCAATGGGTGGCCATTCCAACTTCTATCAGTTGCGTGCTTGTCTTTGGCGGCAAAGATGGAGGAACCTCTAGTTCCGTCACTGTTGGACCTTCAGGTAGAAGGTGCCAAATACCTATTTGAGCCCAGAACAATTAGAAGAATGGAGCTGCTTGTGCTGGGCGTCTTGGATTGGAGGCTAAGATCGGTTACTCCATTTAGCTTCCTCGATTTCTTTGCGTGCAAGTTAGATTCAACTGGAACTTTTACCGGGTTCCTCATTTCACGTGCTACACAAATTATCTTATCTAATATCCAAGAGGCAAGTTTTCTTGCCTATTGGCCATCATGCATTGCTGCAGCGGCCATTCTCCATGCAGCTAACGAAATTCCTAACTGGTCTCTCGTTAGACCCGAGGATGCCGAGTCGTGGTGCGAGGGGCTAATAAAGGAGAAAATTATAGGATGCTACCAATTAATGCAAGAACTTGTGATTGACAATAACCGGAGGAAAACCCCTAAAGTTTTACCGCAGCTGCGAGTGACATCTCGGCCCCTTATAAGGTCTAGTGTCTCGTCATTCTCAGCATCATCCTCTTCTCCTTCATCCTCATTGTCTTGTAAAAGGAGGAAACTAAATAACTGTTTGTGGGTAGATGATGACAAAGGAAACTCCCAGTGA 1203 0.4855 MVTGIAYLYSNKQTYEEHACIFHQQIHSLPKLATATSTSGDFSDRLPATPHRKLWPRPQNEYPPIAMSVSCSNCLPDSLLLCGEDSSGVLSGESPECSSDLDSWPPSEEDSIAGFIEDERHFVPGFEYLNRFQSRSLDASAREESVAWILKVQACYGFQPLTAYLSVNYMDRFLNSRTLPQTNGWPFQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYLFEPRTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAAAILHAANEIPNWSLVRPEDAESWCEGLIKEKIIGCYQLMQELVIDNNRRKTPKVLPQLRVTSRPLIRSSVSSFSASSSSPSSSLSCKRRKLNNCLWVDDDKGNSQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01504 400 CDD CYCLIN_AtCycD-like_rpt2 244 334 - -
Phco4g01504 400 CDD CYCLIN_AtCycD-like_rpt1 141 239 - -
Phco4g01504 400 SUPERFAMILY Cyclin-like 226 348 IPR036915 -
Phco4g01504 400 SMART Cyclin_C_2 244 377 IPR004367 -
Phco4g01504 400 SUPERFAMILY Cyclin-like 101 241 IPR036915 -
Phco4g01504 400 ProSitePatterns Cyclins signature. 142 173 IPR006671 -
Phco4g01504 400 PANTHER CYCLINS 116 341 IPR039361 -
Phco4g01504 400 FunFam D2/4-type cyclin 125 242 - -
Phco4g01504 400 Gene3D - 125 242 - -
Phco4g01504 400 Pfam Cyclin, N-terminal domain 113 241 IPR006671 -
Phco4g01504 400 SMART cyclin_7 147 235 IPR013763 -
Phco4g01504 400 Pfam Cyclin, C-terminal domain 244 352 IPR004367 -
Phco4g01504 400 Gene3D - 116 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01504 Phco-Chr4 13685360 13691117 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01504 4 13685360 13691117 Phco4g01504 4 13685360 13691117 ECH
Phco4g01504 4 13685360 13691117 Phco8g02832 8 41708482 41711914 PCT