Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02738 ATGGAAACATGCAGTGAGGAAAGAGAAAAGGACCAAAGAGAAGCTTCCATACTAGGAGACATCTTAGAGGTTATATTCTCTCACTTGCCACTCATCCACCTTGTCTCACCTTCTCACGTGTCACGTGCATGGAACCGTGCACTCTCCACCTCCCTCCGCCACGTCCACCCCGTCAAGCCCTGGCTCACGCTGCACATCCAGAACCCCCGTACACTGCACCTCACCACCACCTTCGCCTACGACCCACGCTCCCGCACCTGGTTCCAAATCCACGCGCCGCATCCCAACCACACCTCCCCCCTCCGCGCCTCGCACTCCACACTCCTTTACACGCTCTCCCACCGCGAGTTCGCCTTCTCCCTCGACCCCCTCCGTCTCCACTGGCACCACGCGTGCCCCCCGCGAGTGTCGCGCACAGACCCCATCGTCGCGCGCGTGGGACCTTGCATCGTGGTGGCGGGAGGCGCGTGCGACTTCGAGGACGATCCCCTGGCAGTGGAGGCGTACGACATGGAGTCCCGCGCGTGGACCCGCTGCCAGTCGATGCCGGCCATTCTCAAGGACTCCTCCGCTTCCACGTGGCTCTCGGCCGCCGTCGCCGGAGAGAGGATGTACGTGACGGAGAAAAACTCCGGCGTGACGTACACGCTGGATTGCAACACGATGACGTGGAAGGGCCCGTTGGAGGTGCGTCCGAATCTGAGCGTTTTCCACTGCGTGACCGGAGCGATACACGGTCGTTTAATGGTGGCGGGGATGGTGGGCGGGGCCGAGGAGGTAGAGGAGGTGAAGTTGTGGGAAGTGAAAGGGGAATTAGCGGTGGAAAGTGAATTAGGGTATTGGTGTGAGGAGTTAGCGGCGATGCCGAAGGAGATGATGGTGAAGATTATGGGTGAGGTTAGTGGTTCGATTGAGGTTAACTGGATTGGGAATTCTGTGTATTTTCAGAACCTATGGAAAGCGGAGGAGATTGTTGTGTGCGAGGTTGGAAGTGGCGGAAGCTGCGAATGGGAAAGCGTGAGGAACGTAACGGTCAGTGATGTGAGTCGCATGCAGAGAACCGTGTTCTGTGGTGCCCATGTTGGGCTTCGAGATTTGAAGAGGGCGATTAGTAAGAATTGTATGTTTGTGGAGAGAGTAGTGTAA 1146 0.5794 METCSEEREKDQREASILGDILEVIFSHLPLIHLVSPSHVSRAWNRALSTSLRHVHPVKPWLTLHIQNPRTLHLTTTFAYDPRSRTWFQIHAPHPNHTSPLRASHSTLLYTLSHREFAFSLDPLRLHWHHACPPRVSRTDPIVARVGPCIVVAGGACDFEDDPLAVEAYDMESRAWTRCQSMPAILKDSSASTWLSAAVAGERMYVTEKNSGVTYTLDCNTMTWKGPLEVRPNLSVFHCVTGAIHGRLMVAGMVGGAEEVEEVKLWEVKGELAVESELGYWCEELAAMPKEMMVKIMGEVSGSIEVNWIGNSVYFQNLWKAEEIVVCEVGSGGSCEWESVRNVTVSDVSRMQRTVFCGAHVGLRDLKRAISKNCMFVERVV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02738 381 Gene3D - 65 277 IPR015915 GO:0005515
Phco8g02738 381 Pfam F-box domain 20 51 IPR001810 GO:0005515
Phco8g02738 381 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 15 306 - -
Phco8g02738 381 SUPERFAMILY Kelch motif 62 252 IPR015915 GO:0005515
Phco8g02738 381 CDD F-box_SF 20 49 - -
Phco8g02738 381 SUPERFAMILY F-box domain 20 69 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02738 Phco-Chr8 40390968 40392113 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02738 8 40390968 40392113 Phco8g02738 8 40390968 40392113 ECH
Phco4g01419 4 12437878 12439308 Phco8g02738 8 40390968 40392113 PCT