Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01419 ATGTATTTTTATATTTTGAACCAAGTACGTATACTTTATGTTTATTCGTTTTCTCTATTTTTATATGCCTTGAACTTTAATTCTACTCCTTTTTTGGCTCTAGACTGTGACAGAGGTCCTTATCGTTCACCAATACACAATCTGACAAAACTAACGAGGTGGCTTACCTCCATTGGATACACAGGCTTTTTGTTTTCCATTATCATTTTCGAATCACTATATAAACCCCTCAATAACCATTTCTCTCACACTAAGAAAAAACTCAAGTGCAGAGAAACTCATAAACAAACAAACAAACACTCCTTAAATTATTCTCTGTGCTTATTAGTAATGGCAGCAGCAGAAGAAGCACCCATCCACGGCGATATCCTAGAGGCTATATTCTCCCACGTGCCACTCATCCACCTTGTGCCACTCTGTCTCGTGTCAAACTCATGGAAGCGTGCCGTCTCCTCCTCTCTCGCACATCTCCGACCCATTAAGCCCTGGCTCATCGTCCTCACCCAGAGCTCACGCGCCTCGCACGTCACAAAGTTGCACGCTTATGACCCTCGTTCCCACGTGTGGCTCGAGATAAAAAACCCTACGTGTTCTCACTCCTCACCCGTGCGCTCCTCTCACTCCTCGCTACTCTACACGCTCACCCCCGCCGAGTTCGCCTTCTCCCTCGACGCGCTGCACCTCGACTGGAACCACGCGCCCTCCCCACGCGTGTGGCGCACCGACCCCATCGTCGCTCGCGTGGGCTCGCGCGTGGTTGTGTCCGGCGGCGCGTGCGAATTCGAGGACGATCCGCTCGCGGTGGAGATGTACGACTTGGAGAGCCGCGCCTGGGAGACGTGCCCCTCCATGCCGGCTCTTCTGAAGGATTCCACGGCGTCGTCGTGGCTTTCGGTAGCTGTCGTCGGAGAGGTTATGCACGTGACGGAGAAACACTCGGGCGTGACGTACTCGTTCGACACTGTGATGAAAAAATGGAAGGGACCGTTCCATTTGAGACCTGATGAGAGTGTTTTTCACTGCGTCACCGGAACACTAGGGGAGCGGTTGATGGTGGCTGGGGTGGTGGGGGAATTTGGGAACGAGAGAAGCGTGAAGCTGTGGGAGGTTCGGGGGAAATTAGGTTCGGGGATGGTGGAAGTGGGGGAGATGCCGAAGGAGATGGTTCGGAAGGTGATTGGTGGTTCGGAGTTAGGTTCGGTGGAGGTGACGTGGATTGGGGACTTTGTTTACGTGAGGAACACTTCCATTGATGAGGAGTTGGTGGTGTGTGAGATATTGAACGGTGTTGGGTGCGAGTGGAGGAGTGTACGGAACGTCGCCGTGAACCACGGGGCGAGAATGGTGCTTTGCGGCGGCGATGTGTGCATGGAGGATCTGCAGCGGGCGGTTATGTCAGGGACTCGGACATTTTGCATGAAACACGTTTGA 1431 0.5262 MYFYILNQVRILYVYSFSLFLYALNFNSTPFLALDCDRGPYRSPIHNLTKLTRWLTSIGYTGFLFSIIIFESLYKPLNNHFSHTKKKLKCRETHKQTNKHSLNYSLCLLVMAAAEEAPIHGDILEAIFSHVPLIHLVPLCLVSNSWKRAVSSSLAHLRPIKPWLIVLTQSSRASHVTKLHAYDPRSHVWLEIKNPTCSHSSPVRSSHSSLLYTLTPAEFAFSLDALHLDWNHAPSPRVWRTDPIVARVGSRVVVSGGACEFEDDPLAVEMYDLESRAWETCPSMPALLKDSTASSWLSVAVVGEVMHVTEKHSGVTYSFDTVMKKWKGPFHLRPDESVFHCVTGTLGERLMVAGVVGEFGNERSVKLWEVRGKLGSGMVEVGEMPKEMVRKVIGGSELGSVEVTWIGDFVYVRNTSIDEELVVCEILNGVGCEWRSVRNVAVNHGARMVLCGGDVCMEDLQRAVMSGTRTFCMKHV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01419 476 Pfam F-box domain 122 156 IPR001810 GO:0005515
Phco4g01419 476 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 82 374 - -
Phco4g01419 476 SUPERFAMILY F-box domain 122 172 IPR036047 GO:0005515
Phco4g01419 476 Gene3D - 159 451 IPR015915 GO:0005515
Phco4g01419 476 SUPERFAMILY Kelch motif 162 369 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01419 Phco-Chr4 12437878 12439308 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01419 4 12437878 12439308 Phco4g01419 4 12437878 12439308 ECH
Phco4g01419 4 12437878 12439308 Phco8g02738 8 40390968 40392113 PCT