Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02630 ATGAAGAGGGTGAAGAAGCTAGACCCATTGCAGCTCCTTTCCTATAGGCCTAAACCTCTTCAAATTTTCATGGCCATGATGTTTCTCTATTTGCTCTTCACCACCTTCGAAGTCGAAACTTCTCTTGCTTTCACCAGGTCTGTGTCAGTGTCCTCCTTGCTGGGGACGGAACACGAATACAGCCTTCTCACCAAAGCCTCAAACTCTCCCTCACAAGGGGTGTTCCAAGGTTCAGTGCATCGAAAAACCATGCAGGGGTTGCAGAAAGTTTCTACCTTGAGCTTTATTGAGGCTTTGAACGACAGTAATGTTGCTAAAAACGAGGTTTCTGAACTCCACAAGGCTGCTAGGCATGCTTGGTTTCAAGGGAAGAGGCTTTGGGAAGAAATGGAGAGTGTGATGAAAACCGAGAATGTGATAAGGTTCAAGGCTCAGAACCTTTCTGATTCGTGTCAGAATTCAATATCTTTATCTGGTTCTGAATTGAGGGGGGAGAAAGGGGTCAAGGTGATGATGCTTCCTTGTGGGTTGACATTGGGGTCTCATGTTACTGTTGTGGGGACCCCTCATTGGGCTCACTGGGAGGATGATCCTAAAATATCTGTGGTGAAGGAAGGGGAGGGGAAGGTGATGGTGTCACAGTTCATGATGGAGCTTCAGGGTTTGAAGAGTGTGGACAAGGAAGAGCCTCCCAGGATACTGCATTTCAACCCCAGGTTGAAGGGGGATTATACTGGGAAGCCTGTTATTGAGCAGAACACTTGTTACAGGATGCAGTGGGGTTCTGCTCTCAGGTGTGAGGGATGGAAATCCCGGGCTGATGAGGATACTGTTGATGAACATGTGAAATGTGAAAAGTGGATTCGTGATGATGATAACCGAACGGAAGAGGCAAAGGCAACATGGTGGTTAACCAGACTGATAGGGCGAACTAAGAAGGTGACTGTAGATTGGCCATACCCTTTTGTTGAGGGGAGATTATTTGTTCTAACCGTAAGTGCTGGATTGGAAGGTTACCATGTTAGTGTGGATGGAAGGCATGTGACGTCTTTTCCTTATCGCACGGGCTTTTCTCTTGAGGATGCGACTGGTCTATCCGTAAAAGGGGATGTTGATGTGCACTCTATATTTGCAGCTTCCTTACCTACATCACATCCAAGTTTTGCTCCACAAATGCATATTGAATTACTTCCTCAGTGGAAAGCTCCAGTGCTTCTCCATGTAAATGTAGAGCTTTTCATTGGAATACTTTCTGCTGGCAACCATTTTGCTGATCGGATGGCAGTGAGGAAATCGTGGATGCAACATAAACTAGTCAAATCTTCAAATGTCGTGGCTCGCTTCTTTGTTGCCTTGCATGGAAGGAAAGATTTAAATGTAGAGATAAAGAAAGAAGCAGATTATTTTGGCGACATTGTTATTGTCCCCTACATGGATCATTATGATCTGGTTGTGTTGAAGACAATAGCTATCACCGAATATGGGATTGGAGTGGCCGCCAAGTATATCATGAAGTGCGATGATGACACGTTTGTCAGAGTAGATTCTATGATCAGCGAAGTAAGAAAAGTAACAAGTGGCAGAAGTTTGTATATTGGAAATATGAATTATCACCACAGGCCTCTACGTAATGGCAAATGGGCAGTGACGTATGAGGAATGGTCAAAGGAAGAGTATCCTACCTATGCTAATGGTCCAGGTTATATAATCTCTTCAGACATTGCTCGCTTCATTGTATCCAACTTCGAGAAGCACAGACTGAAATTATTTAAAATGGAGGATGTGAGCATGGGGATGTGGGTAGAACAATTCAACAGTTCAAGAGCAGTTGAATATGTGCACAGCTTGAAATTCTGCCAATTTGGTTGCATTGAAGATTACTACACTGCACATTACCAATCTCCACGACAAATGACCTGTATGTGGCATAAGTTGCAAGACCAGGGAAAACCCTTATGTTGCAACATGAGATAA 1974 0.4417 MKRVKKLDPLQLLSYRPKPLQIFMAMMFLYLLFTTFEVETSLAFTRSVSVSSLLGTEHEYSLLTKASNSPSQGVFQGSVHRKTMQGLQKVSTLSFIEALNDSNVAKNEVSELHKAARHAWFQGKRLWEEMESVMKTENVIRFKAQNLSDSCQNSISLSGSELRGEKGVKVMMLPCGLTLGSHVTVVGTPHWAHWEDDPKISVVKEGEGKVMVSQFMMELQGLKSVDKEEPPRILHFNPRLKGDYTGKPVIEQNTCYRMQWGSALRCEGWKSRADEDTVDEHVKCEKWIRDDDNRTEEAKATWWLTRLIGRTKKVTVDWPYPFVEGRLFVLTVSAGLEGYHVSVDGRHVTSFPYRTGFSLEDATGLSVKGDVDVHSIFAASLPTSHPSFAPQMHIELLPQWKAPVLLHVNVELFIGILSAGNHFADRMAVRKSWMQHKLVKSSNVVARFFVALHGRKDLNVEIKKEADYFGDIVIVPYMDHYDLVVLKTIAITEYGIGVAAKYIMKCDDDTFVRVDSMISEVRKVTSGRSLYIGNMNYHHRPLRNGKWAVTYEEWSKEEYPTYANGPGYIISSDIARFIVSNFEKHRLKLFKMEDVSMGMWVEQFNSSRAVEYVHSLKFCQFGCIEDYYTAHYQSPRQMTCMWHKLQDQGKPLCCNMR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02630 657 Gene3D - 169 377 - -
Phco8g02630 657 SMART Gal_bind_lectin_2 173 378 IPR001079 GO:0030246
Phco8g02630 657 FunFam Hydroxyproline O-galactosyltransferase 403 645 - -
Phco8g02630 657 Pfam Galactosyltransferase 425 605 IPR002659 GO:0006486|GO:0016020|GO:0016758
Phco8g02630 657 FunFam Hydroxyproline O-galactosyltransferase GALT2 293 377 - -
Phco8g02630 657 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 346 606 IPR002659 GO:0006486|GO:0016020|GO:0016758
Phco8g02630 657 CDD GLECT 173 377 IPR001079 GO:0030246
Phco8g02630 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 171 377 IPR013320 -
Phco8g02630 657 Gene3D - 406 648 - -
Phco8g02630 657 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 169 379 IPR001079 GO:0030246
Phco8g02630 657 Pfam Galactoside-binding lectin 170 377 IPR001079 GO:0030246
Phco8g02630 657 FunFam Hydroxyproline O-galactosyltransferase GALT4 168 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02630 Phco-Chr8 38372832 38379251 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01565 4 14769593 14773736 Phco8g02630 8 38372832 38379251 PCT