Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01565 ATGAAAAGGGGTAGTAAAGTAGACCTGTTTGTTCAACCCAACAGGCTCACACTGCTCCAGATTTTCATGGTGGTCATGCTCTTTTACTTGCTCTTCATGAGCTTCGAAATCCCTCTCGCTTTCAGAGCCGGGTTGGGTTCCGAAAATGGCGCTGTTTTCCTCACCGACGCATTGCCTATGTCCATGCCACTCTTGCTTGAAGAACCGAACCATGGGGTACAAATTCGCGGGCCCAGAGGGTTGAAGTTGGAGAAAGTTTCCTCCTTGAGGTTCAACGGGAGCTTCTCGGAGGGTTCGGAGCTGCACAAGGTGGCGCGGCACGCGTGGGTCGCTGGGGAGAAGCTCTGGGGGGATGTGGAGAGTGGGAAAGTGAAGAGCTTTGCAAAGGTGACGGTTGAAAACGGGTCGGACTCGTGCCCGAATTCGGTTTCGGTTTCCGGGACGGAGTTTCGGGGCAAAGGGGTGATGGTGTTGCCGTGCGGACTGACGCTCTGGTCGCACGTGACGGTGGTGGGGACGCCGCGGTGGGCGCATGCGGAGAGGGACCCTAAGATAGCGGTAGTAAGGGAGGGGAATGAGGCGGTGATGGTGTCGCAGTTCATGATGGAGTTGCAGGGTTTGAAGGCTGTGGACAAAGAGGAACCGCCGAGGATTCTGCATTTCAATCCTAGGTTGAGAGGGGATTGGAGTGGGAAGCCTGTGATTGAGCAGAATACTTGCTATAGGATGCAGTGGGGTTCTGCTCTCAGGTGCGAGGGGTGGAAGTCTCGTGCGGACGAGGAAACTGTTGATGGACATCTAAAATGTGAAAAGTGGATTCGTGATGACAACAATCGTTCCGAAGAATGGAAAACAACATGGTGGTTAAACAGATTGATAGGAAGAAAAAAGAAGGTGACAGTTGATTGGCCATATCCTTTTGCAGAGGGTAAGTTATTTGTTCTGACCATAAGTGCTGGCTTGGAAGGTTACCATGTTAGTGTGGATGGAAGGCATGTGACATCCTTTCCCTATCGCACGGGATTTGCTCTTGAGGATGCTACTGGACTGTCCATAAATGGTGATGTTGATGTGCACTCTATATTTGCTGCTTCCTTACCTACATCGCATCCTAGCTTTGCTCCTCAGATGCATCTTGAATTGCTTCCTCAGTGGAAAGCCCCTCCTCTTCACAATGTGAATGTGGATCTTTTCATTGGTATTCTTTCTGCTGGAAATCATTTTGCTGAAAGGATGGCTGTGAGGAAGTCCTGGATGCAGCACAAGCTAATCAAATCTTCACATGTTGTGGCTCGATTTTTTGTAGCCTTGCATGCAAGGAAGGATATAAATGTGGACATAAAGAAAGAAGCAGAGTATTTCGGTGATATTATTATAGTCCCATACATGGATCATTATGACCTTGTTGTGTTGAAGACCATAGCTATCTGTGAATATGGGATTCATACAGTGGCTGCTAAGTATATCATGAAGTGTGATGATGACACATTTGTCAGAGTGGATTCTATCGTAGATGAAATAAGGAAAGCTCAAACTGATAGAAGTCTCTACATGGGAAATATGAATTACCACCACAGGCCTCTTCGCTATGGGAAATGGGCTGTAACTTATGAGGAATGGGTAGAGGAAGAGTATCCTATCTATGCCAATGGTCCAGGTTACATAGTCTCTGCTAACATTGCTCAATTCATTGTATCTGAATTCGAGAAGCGCAAATTAAAATTATTTAAAATGGAGGACGTGAGCATGGGAATGTGGGTGGAGCAGTTCAACAGCACAAGAGCAGTAGAGTATGTGCACAACTTGAAGTTCTGTCAATTTGGGTGCATTGAAGAGTACTACACTGCACATTACCAATCACCGAGACAAATGACATGCATGTGGGAAAAATTGCAACATCAAGGAAAACCACTCTGTTGCAACATGAGATGA 1932 0.4705 MKRGSKVDLFVQPNRLTLLQIFMVVMLFYLLFMSFEIPLAFRAGLGSENGAVFLTDALPMSMPLLLEEPNHGVQIRGPRGLKLEKVSSLRFNGSFSEGSELHKVARHAWVAGEKLWGDVESGKVKSFAKVTVENGSDSCPNSVSVSGTEFRGKGVMVLPCGLTLWSHVTVVGTPRWAHAERDPKIAVVREGNEAVMVSQFMMELQGLKAVDKEEPPRILHFNPRLRGDWSGKPVIEQNTCYRMQWGSALRCEGWKSRADEETVDGHLKCEKWIRDDNNRSEEWKTTWWLNRLIGRKKKVTVDWPYPFAEGKLFVLTISAGLEGYHVSVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIFAASLPTSHPSFAPQMHLELLPQWKAPPLHNVNVDLFIGILSAGNHFAERMAVRKSWMQHKLIKSSHVVARFFVALHARKDINVDIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIHTVAAKYIMKCDDDTFVRVDSIVDEIRKAQTDRSLYMGNMNYHHRPLRYGKWAVTYEEWVEEEYPIYANGPGYIVSANIAQFIVSEFEKRKLKLFKMEDVSMGMWVEQFNSTRAVEYVHNLKFCQFGCIEEYYTAHYQSPRQMTCMWEKLQHQGKPLCCNMR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01565 643 FunFam Hydroxyproline O-galactosyltransferase GALT4 153 271 - -
Phco4g01565 643 FunFam Hydroxyproline O-galactosyltransferase GALT2 278 362 - -
Phco4g01565 643 SMART Gal_bind_lectin_2 158 363 IPR001079 GO:0030246
Phco4g01565 643 Pfam Galactoside-binding lectin 155 362 IPR001079 GO:0030246
Phco4g01565 643 SUPERFAMILY Concanavalin A-like lectins/glucanases 156 362 IPR013320 -
Phco4g01565 643 Gene3D - 188 362 - -
Phco4g01565 643 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 154 364 IPR001079 GO:0030246
Phco4g01565 643 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 331 592 IPR002659 GO:0006486|GO:0016020|GO:0016758
Phco4g01565 643 Gene3D - 387 636 - -
Phco4g01565 643 FunFam Hydroxyproline O-galactosyltransferase 388 631 - -
Phco4g01565 643 CDD GLECT 158 362 IPR001079 GO:0030246
Phco4g01565 643 Pfam Galactosyltransferase 410 590 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01565 Phco-Chr4 14769593 14773736 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01565 4 14769593 14773736 Phco4g01565 4 14769593 14773736 ECH
Phco4g01565 4 14769593 14773736 Phco8g02630 8 38372832 38379251 PCT