Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02620 ATGCCGTCTCATGCGGATCTGGAGCGTCAGATCGAGCAGCTGATGGAGTGCAAGCCTCTGGCGGAGTCGGAGGTGAAGACGCTGTGCGATCAGGCGAGGGCGATTCTGGTGGAGGAGTGGAACGTGCAACCGGTGAAGTGCCCGGTCACCGTCTGCGGCGATATTCACGGTCAGTTCTACGATCTCATCGAGTTGTTTCGGATTGGAGGAAGTGCACCCGATACCAATTATCTCTTCATGGGTGATTATGTAGATCGTGGATACTATTCAGTGGAGACTGTTTCTCTTTTGGTGGCTTTGAAAGTTCGTTACAGGGATAGAATCACAATTCTTAGGGGAAATCATGAAAGCCGTCAAATTACTCAAGTGTATGGGTTCTATGATGAATGCTTGAGAAAATATGGAAATGCCAATGTCTGGAAATACTTCACAGACTTGTTTGATTATTTACCTCTGACTGCCCTCATTGAGAGTCAGGTTTTCTGCTTGCATGGAGGTCTCTCACCTTCTTTGGATACTCTGGATAACATCAGAGCATTGGATCGTATACAAGAGGTTCCACATGAAGGACCAATGTGTGATCTATTGTGGTCAGACCCTGATGATCGCTGTGGATGGGGAATATCTCCCCGTGGGGCAGGATACACATTTGGACAGGATATTGCTACTCAGTTTAATCATACTAATGGTCTCTCCCTGATATCTAGAGCTCATCAGCTTGTTATGGAAGGATACAACTGGTGCCAGGACAAGAATGTGGTTACCGTATTTAGCGCTCCAAATTACTGTTACCGATGTGGGAATATGGCTGCCATACTAGAAATAGGAGAGAATATGGATCAGAGTTTTCTTCAGTTTGATCCAGCTCCCAGGCAAATTGAGCCTGACACCACACGCAAGACTCCAGATTATTTTTTGTAA 921 0.4604 MPSHADLERQIEQLMECKPLAESEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIATQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQSFLQFDPAPRQIEPDTTRKTPDYFL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02620 306 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
Phco8g02620 306 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 5 306 IPR047129 GO:0004722
Phco8g02620 306 SMART pp2a_7 20 290 IPR006186 GO:0016787
Phco8g02620 306 SUPERFAMILY Metallo-dependent phosphatases 6 293 IPR029052 -
Phco8g02620 306 CDD MPP_PP2A_PP4_PP6 6 290 - -
Phco8g02620 306 PRINTS Serine/threonine phosphatase family signature 230 250 IPR006186 GO:0016787
Phco8g02620 306 PRINTS Serine/threonine phosphatase family signature 174 201 IPR006186 GO:0016787
Phco8g02620 306 PRINTS Serine/threonine phosphatase family signature 252 268 IPR006186 GO:0016787
Phco8g02620 306 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Phco8g02620 306 PRINTS Serine/threonine phosphatase family signature 145 171 IPR006186 GO:0016787
Phco8g02620 306 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Phco8g02620 306 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Phco8g02620 306 Pfam Calcineurin-like phosphoesterase 48 239 IPR004843 GO:0016787
Phco8g02620 306 FunFam Serine/threonine-protein phosphatase 1 306 - -
Phco8g02620 306 Gene3D - 2 306 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02620 Phco-Chr8 38082892 38089992 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02620 8 38082892 38089992 Phco8g02620 8 38082892 38089992 ECH
Phco4g01552 4 14583186 14586652 Phco8g02620 8 38082892 38089992 PCT