Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02427 ATGATAGGTAGCAGAGCAGGGCAAGGCAAAACAATCTCCACCGACCGACCATTCAATGGCCTTTCTCAGCTTTATATCAACACTTCTGTTCCGCAAAATCTTCGCTTTTGCTTCTCAATTTTACCTGCTTTGAGAGTGACAACCCTTGTTCCTGTTTCATTCACGTCAACCTCGATAGATTCATCCCTTACAGAAGCACAAATGACTGCTGAAGATCAAGTGCCAAAGATTGAACTGCTAACATGGACCGATGATGAGTATGGTGGTGTTATTGTGGAAATGGACAAGCCTATGGATTCTGCAACCTTATTGTCCACCCTCAGAGCTTCAATTTCACACTGGAAACAGCTGGGCAAGAAGGGTGTTTGGATAAAATTGCCTATTTATCTGGTCAGTCTAGTTGAAGCTCTAGTTAAGGAAGGATTTTGGTATCACCATGCAGAACCAAAATATTTAATGCTTGTATATTGGATTCCTGACTCTGCAGATACTATTCCAGCAAATGCCACACACCGCGTGGGTGTCGGATCATTTGTCGTAAATGAAAAACAAGAGGTCCTAGTGGTTCAAGAAAAGAGTGGACATTTTCAAGGAAGTGGAGCCTGGAAATTCCCTACTGGCGTTGTTGATCAGGGAGAAGATATTTGTGCAGCAGCAGTGAGAGAGGTCAAAGAAGAAACAGGAGTTGATGCTGAATTTCTTGAAGTATTGGCATTCAGACAAAGTCACATGTCATTCTTTGAGAAGTCAGATCTATTCTTTGTGTGCTTGCTGCGCCCTCTTTCATCTGATATTCAAATACAGGAGGTAGAGATAGAGGCTGCAAAGTGGATGCCATTTGATGAGTACGCAGCCCAGCCAATTATGGAAAAGTATGAGCTTATGAAGTACATCAATGATATCTACTCAGCAAAGATTGATGGGCAATATTCTGGATTTACTCCTGTATCTACTGCGTCAAACTTCTCTAAGAAAAATATCTATCTTTACTTGAATGCCCGTGGCCTGAAGAGGAGCAATTCTTTGTAA 1029 0.4189 MIGSRAGQGKTISTDRPFNGLSQLYINTSVPQNLRFCFSILPALRVTTLVPVSFTSTSIDSSLTEAQMTAEDQVPKIELLTWTDDEYGGVIVEMDKPMDSATLLSTLRASISHWKQLGKKGVWIKLPIYLVSLVEALVKEGFWYHHAEPKYLMLVYWIPDSADTIPANATHRVGVGSFVVNEKQEVLVVQEKSGHFQGSGAWKFPTGVVDQGEDICAAAVREVKEETGVDAEFLEVLAFRQSHMSFFEKSDLFFVCLLRPLSSDIQIQEVEIEAAKWMPFDEYAAQPIMEKYELMKYINDIYSAKIDGQYSGFTPVSTASNFSKKNIYLYLNARGLKRSNSL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02427 342 FunFam Nudix hydrolase 8 172 310 - -
Phco8g02427 342 ProSiteProfiles Nudix hydrolase domain profile. 170 300 IPR000086 -
Phco8g02427 342 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 130 148 IPR003293 -
Phco8g02427 342 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 256 280 IPR003293 -
Phco8g02427 342 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 152 168 IPR003293 -
Phco8g02427 342 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 168 186 IPR003293 -
Phco8g02427 342 SUPERFAMILY Nudix 138 293 IPR015797 -
Phco8g02427 342 ProSitePatterns Nudix box signature. 207 228 IPR020084 GO:0016787
Phco8g02427 342 Gene3D - 77 162 - -
Phco8g02427 342 Pfam Nudix hydrolase domain 80 158 IPR040618 -
Phco8g02427 342 Pfam NUDIX domain 171 286 IPR000086 -
Phco8g02427 342 FunFam nudix hydrolase 2 77 163 - -
Phco8g02427 342 PANTHER NUDIX HYDROLASE RELATED 56 339 IPR003293 -
Phco8g02427 342 CDD Nudix_Hydrolase_12 171 302 - -
Phco8g02427 342 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 172 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02427 Phco-Chr8 27216883 27220654 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02427 8 27216883 27220654 Phco11g00920 11 6795758 6799926 PCT