Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00920 ATGCTCAGATCACTTCCCAAGCTCTCACTCCTCTTTTCCTCAGCTAGGAATCCTCGCTATCTTACAACTTCTCAGCGTTTCATATCTCAAGGGAGAAGACCAACTTCAAGAGTCTCCTATCCAAATTTATCCGCAATTTCATCAGCAATTGCATCAGAAACTTCCGCAGAAGATCAAGCTCAACAGACTAAGCTATTAACATCAACTGATGATAATTATGGTGGTGTTACTGTGGAACTGGATCATCCTATGGATTCTTCAGCATTTATCCCAGTCCTTAGGGCTTCGGTTTCTCACTGGAAGCAGCTGGGCAAGAAAGGTGTTTGGATAAAATTACCTATTCATTTAGCCAGTCTAGTTGAAGCTTTAGTTAAGGAGGGGTTTTGGTATCATCATGCTGAACCAAATTATTTAATGCTTGTATATTGGATTCCTGACAGTCCAAGTACTATTCCTGCAAATGCCACACACAGGGTGGGGGTTGGTTCATTACTCATGAATGAAAAAAAAGAGGTCCTAGTTGTTCAAGAGAATAGTGGACTATTTCAAGGAACTGGAATTTGGAAATTGCCAACTGGAGTTGTTGATCAGGGAGAAGATATTTGTGTAGCAGCAGTAAGAGAGGTCAAAGAAGAAACAGGGATTGATTCAGAATTTGTGGAAGTATTAGCATTCAGACAAAGTCATAATTCATTCTTTGAGAAGTCAGACTTATTCTTCGTGTGCATGTTGCGGCCTCTTTCTTTTAACATCCAAACACAGAGATTTGAGATACTGGATGCACAGTGGATGCCATTTGAGGAATATGCAGCCCAGCCATTCGTCCAAAAGAGTGAGCTTCTGAAGTACATAAATGATACATGTTTGGCAAAGATGGGTGGACAATATTCTGGATTTTGTCCTGTATCTACGTCATCGAACTTTTCTGATCAAAAGAATTATCTGTACTTGAATGCTGGGACCTTAAAGAGCTCCTATTCTTCCTGA 987 0.4032 MLRSLPKLSLLFSSARNPRYLTTSQRFISQGRRPTSRVSYPNLSAISSAIASETSAEDQAQQTKLLTSTDDNYGGVTVELDHPMDSSAFIPVLRASVSHWKQLGKKGVWIKLPIHLASLVEALVKEGFWYHHAEPNYLMLVYWIPDSPSTIPANATHRVGVGSLLMNEKKEVLVVQENSGLFQGTGIWKLPTGVVDQGEDICVAAVREVKEETGIDSEFVEVLAFRQSHNSFFEKSDLFFVCMLRPLSFNIQTQRFEILDAQWMPFEEYAAQPFVQKSELLKYINDTCLAKMGGQYSGFCPVSTSSNFSDQKNYLYLNAGTLKSSYSS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00920 328 ProSitePatterns Nudix box signature. 193 214 IPR020084 GO:0016787
Phco11g00920 328 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 158 292 - -
Phco11g00920 328 Pfam Nudix hydrolase domain 66 144 IPR040618 -
Phco11g00920 328 FunFam Nudix hydrolase 8 158 296 - -
Phco11g00920 328 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 242 266 IPR003293 -
Phco11g00920 328 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 138 154 IPR003293 -
Phco11g00920 328 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 116 134 IPR003293 -
Phco11g00920 328 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 154 172 IPR003293 -
Phco11g00920 328 ProSiteProfiles Nudix hydrolase domain profile. 156 288 IPR000086 -
Phco11g00920 328 CDD Nudix_Hydrolase_12 157 288 - -
Phco11g00920 328 Gene3D - 62 149 - -
Phco11g00920 328 SUPERFAMILY Nudix 124 277 IPR015797 -
Phco11g00920 328 PANTHER NUDIX HYDROLASE RELATED 44 323 IPR003293 -
Phco11g00920 328 FunFam nudix hydrolase 2 63 149 - -
Phco11g00920 328 Pfam NUDIX domain 157 276 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00920 Phco-Chr11 6795758 6799926 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00920 11 6795758 6799926 Phco11g00920 11 6795758 6799926 ECH
Phco8g02427 8 27216883 27220654 Phco11g00920 11 6795758 6799926 PCT