Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02420 ATGGGGGTTGCTTCCCAGGATGCCATCAAGCAGTTCCAGGCATTCATTGACCAAGTTGAGGAGCCTTTGCGAAGAACATTTCAGAATGTTCATCAAGGATATGTCACCGAAACTTTAATGCGGTTCCTAAAAGCAAGGGACTGGGATCCTTCCAAAGCCTATAAAATGTTGGTTGACTGTTTAAATTGGAGAGTGCAAAATGAGATTGACCATATATTATCTAAACCAATTGTTCCCGCTGATTTATATACAGCAGTGCGTGATTCACAGCTCATAGGATTTTCTGGTTACTCTAAAGAGGGTCTGCCTGTCTTTGCAATCGGAGTTGGGCTTAGCACATTTGACAAAGCATCTGTCCATTATTACGTGCAGTCACACATTCAAATTAATGAATATCGTGACCGTATAATCTTGCCTTCTGCATCAAAGAAGCATAAGCGGACTATTACCACTTGTATAAAGGTTTTAGACATGACCGGTCTGAAGTTATCAGCCCTGAATCAGATTAAGTTGTTAACTATTATATCATCCATTGATGATCTGAATTACCCTGAGAAGACAAATACATATTACATTGCAAATGCTCCATACGTATTTTCAGCTTGTTGGAAGGTTGTGAAGCCACTTTTACAAGAGAGAACAAGAAGAAAAATACAGGTTTTACCCGGTTGTGGTCGAGATGAGCTGTTGAATGTCATGGATTACTCGTCGCTACCACATTTCTGTAAAAGAGAAGGCTCCGGATCATCCAAACATTCAGAAACTGGAAGTGAAAATTGTTATTCCTTGGATCATCCCTTCCATCAAGAGCTCTATAACCACATTAAGCAGCAAGCCAGACAACGTGAAACTGTTGAACCCATCAAACAGGGCTCGTTTCACGTGGATTTTCCAGAACCTCCTGATGATGAATCTGAGATTGCCAAGACTATAGAGTCAGAGTTACACAAGTTTGAGAACGGCAATGGTGTCTAA 975 0.4072 MGVASQDAIKQFQAFIDQVEEPLRRTFQNVHQGYVTETLMRFLKARDWDPSKAYKMLVDCLNWRVQNEIDHILSKPIVPADLYTAVRDSQLIGFSGYSKEGLPVFAIGVGLSTFDKASVHYYVQSHIQINEYRDRIILPSASKKHKRTITTCIKVLDMTGLKLSALNQIKLLTIISSIDDLNYPEKTNTYYIANAPYVFSACWKVVKPLLQERTRRKIQVLPGCGRDELLNVMDYSSLPHFCKREGSGSSKHSETGSENCYSLDHPFHQELYNHIKQQARQRETVEPIKQGSFHVDFPEPPDDESEIAKTIESELHKFENGNGV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02420 324 Gene3D - 3 292 IPR036865 -
Phco8g02420 324 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Phco8g02420 324 CDD SEC14 83 241 IPR001251 -
Phco8g02420 324 SUPERFAMILY CRAL/TRIO N-terminal domain 13 76 IPR036273 -
Phco8g02420 324 SUPERFAMILY CRAL/TRIO domain 83 278 IPR036865 -
Phco8g02420 324 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN 1 323 - -
Phco8g02420 324 Pfam CRAL/TRIO domain 90 241 IPR001251 -
Phco8g02420 324 SMART sec14_4 86 247 IPR001251 -
Phco8g02420 324 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 82 239 IPR001251 -
Phco8g02420 324 Pfam CRAL/TRIO, N-terminal domain 24 59 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02420 Phco-Chr8 27124197 27127983 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02420 8 27124197 27127983 Phco11g00946 11 6967136 6970859 PCT