Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02227 ATGGAAAACGACGAAGGTAAGGAAATCGAAGCTAATGACTACGAGCTCAGCGGCAAGATAATGCTAACCGCCATCGTCGCTCTCTTCGTCGTCATCATCATAATGCTTTGCCTCCACGTCTACGTCCGTTGCAGCCTCGTTCGAGCTCGCCGCCGGCAACAACTTCGCCGCAGAACCAACCGCCCGCAGTTCCTGTTCTACATCGACCCCGCCGCCCGCATTGCCCTCACCTCACGTGGCCTCCACCCCTCCGTCATCTCCACGCTCCCCGTCTTCACCTTCTCTGCTTCCGCCCAACCATCGGAATGCGCGGTTTGTTTGTCGGAGTTTGAGAACGGGGAAACGGGTCGGATCTTACCCAAATGCAATCATAGTTTCCACACTGAGTGTATCGACATCTGGTTCCAGTCCCACACCACGTGTCCGCTTTGCAGGGCGCCTGTCGAGGCCATTCCCGACCAAGAAACCCGATCTGAGGTGGCTGTTGTGTGTGAACCCGAGCCGGTTGGGGAAGAGGTTGACCGGTCTATACCAGTTGGCTCTTCTTCTTCTTCTTCTGCGTTGCGTAACGAGAGTTTGGGGCGTGAGACGGAGTCGTCATTTTGTTCGCCCGTGAGTCGGATAGTGTCGTTCAAGAGGATTCTGAGCAGAGAGAAGAAGGGAAGCGTTTCGGGGTGTGTGGTGGGAGGGTGCAGCTCCATGACCGAGTTAGATGCAGAACGGGGAGAGTCTGACTCGGTGAGTTGTTGA 750 0.56 MENDEGKEIEANDYELSGKIMLTAIVALFVVIIIMLCLHVYVRCSLVRARRRQQLRRRTNRPQFLFYIDPAARIALTSRGLHPSVISTLPVFTFSASAQPSECAVCLSEFENGETGRILPKCNHSFHTECIDIWFQSHTTCPLCRAPVEAIPDQETRSEVAVVCEPEPVGEEVDRSIPVGSSSSSSALRNESLGRETESSFCSPVSRIVSFKRILSREKKGSVSGCVVGGCSSMTELDAERGESDSVSC 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02227 249 CDD RING-H2_EL5-like 102 145 - -
Phco8g02227 249 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 13 153 IPR044675 -
Phco8g02227 249 SUPERFAMILY RING/U-box 100 152 - -
Phco8g02227 249 Pfam Ring finger domain 102 145 IPR001841 -
Phco8g02227 249 FunFam E3 ubiquitin-protein ligase ATL6 70 151 - -
Phco8g02227 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 150 IPR013083 -
Phco8g02227 249 SMART ring_2 103 144 IPR001841 -
Phco8g02227 249 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02227 Phco-Chr8 23917295 23918044 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02227 8 23917295 23918044 Phco8g02227 8 23917295 23918044 ECH
Phco8g02227 8 23917295 23918044 Phco7g02957 7 48396039 48396857 PCT