Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco7g02957 | ATGGCTCAAGAGGGAGGAGATGAAGCCACACCAGTTTTCAAAGAGAGAAACCCAATCCCTCGAGATCTCGATGACCAGAATTACAGTCTCAGCGGAAAAATCATGCTCTCCGCGATCGTTCTACTCTTCTTCATCGTCATTTTAATGCTCTGTCTCCACATCTATGCGCGCTGGTACCTCAGACGCGCGCGCCGCCGCCACCGCGAGCTCCGCCGTACGCAGCTCATGGTCTCCAGCGCCGCCCCCACCACCGCCGCGGTCTCCCGCGGCCTCGACGCCGCTGTCCTCGCCTCGCTACCCGTGTTCACTTACGACCCCAGGGCACACCCGGAAAACGCGCCGGAATGTGCGGTCTGCTTGTCGGAGTTCGAGCTGGGCGAACCGGGTCGGGTCTTACCAAAGTGTAACCACTGCTTCCACACCGACTGCATCGACATGTGGTTTCACTCGCACGCCACGTGTCCACTTTGTCGCGCACCGGTCGAGCGCACGGCTGAACCGGAAGTTGTTATAACTGTAAGTGAACCTGAACCCGGTTCGGGCGAGAACCGAACCGGTTCTACATCTTCTCCTTCCTCTTCGGTTGGTTCGACGAAATCTTCGTTGGTTGGTGTGACCGTTGAGGTGCCTCCGCGGGACGAGAGTTTGCGTGACGAGAATTCGACGTCGTTTCGGTCGCCGATGAGTCGCATGTTGTCGTTTACGAGGATTCTGAGCAGAGAACGGAGGGGGAACGTGTCGCCATCGTCTTGCGGTGGTGATTGTAGCTCCGCCGCCCAGTGCGATGCGGAGCGAGGTGGGCGCGAGGAGACTCAGTGA | 819 | 0.5897 | MAQEGGDEATPVFKERNPIPRDLDDQNYSLSGKIMLSAIVLLFFIVILMLCLHIYARWYLRRARRRHRELRRTQLMVSSAAPTTAAVSRGLDAAVLASLPVFTYDPRAHPENAPECAVCLSEFELGEPGRVLPKCNHCFHTDCIDMWFHSHATCPLCRAPVERTAEPEVVITVSEPEPGSGENRTGSTSSPSSSVGSTKSSLVGVTVEVPPRDESLRDENSTSFRSPMSRMLSFTRILSRERRGNVSPSSCGGDCSSAAQCDAERGGREETQ | 272 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco7g02957 | 272 | MobiDBLite | consensus disorder prediction | 172 | 272 | - | - | |
| Phco7g02957 | 272 | MobiDBLite | consensus disorder prediction | 240 | 256 | - | - | |
| Phco7g02957 | 272 | MobiDBLite | consensus disorder prediction | 178 | 204 | - | - | |
| Phco7g02957 | 272 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 91 | 166 | IPR013083 | - | |
| Phco7g02957 | 272 | CDD | RING-H2_EL5-like | 115 | 158 | - | - | |
| Phco7g02957 | 272 | FunFam | E3 ubiquitin-protein ligase ATL6 | 79 | 164 | - | - | |
| Phco7g02957 | 272 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 25 | 164 | IPR044675 | - | |
| Phco7g02957 | 272 | SMART | ring_2 | 116 | 157 | IPR001841 | - | |
| Phco7g02957 | 272 | Pfam | Ring finger domain | 115 | 158 | IPR001841 | - | |
| Phco7g02957 | 272 | SUPERFAMILY | RING/U-box | 97 | 163 | - | - | |
| Phco7g02957 | 272 | ProSiteProfiles | Zinc finger RING-type profile. | 116 | 158 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco7g02957 | Phco-Chr7 | 48396039 | 48396857 | Transposed |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco7g02957 | 7 | 48396039 | 48396857 | Phco7g02957 | 7 | 48396039 | 48396857 | ECH | |
| Phco8g02227 | 8 | 23917295 | 23918044 | Phco7g02957 | 7 | 48396039 | 48396857 | PCT |