Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02089 ATGGAGGAATTTCAGTGTCACCCATCGTCCCACCCTCTCTCTCTCTCTCTGACTTCAAACCACCATTTCAATGAAAAAAACTATATATTAGTTAAAGGTTTACTGAAAATGAGGAAGTGGTATGGAGGCTTGTTGATAATAGCTTTGGGTATGATGTTGTTTTTCGTCTACAACCTAAAAGGAATTCACTCACAGAAGCAGTCAGCAAAACAATCAGCTTACAATTTTTTTAATAACCATACACCAGATGATTCTATCAAACAAAGCAGCAATCTTTCAGTAAACTCTTCTGAGATGGAACTAAAAAGGGTACCGAAACCAACAAGAAGGCCATATTTGGTACATGTTGCAGGGCTTGATGATCTGTATGGCATGAAAAATTTATCCAAAGGAGAGATGGATTCTGTGCTTATTTGGGATTCCTTACGTACCTTGCTGTCAAGGTCGGATGCTTTGGATGGAACCGCTCAAGGAATTAAAGAGGCTTCTGTAGCATGGAAAGAGTTGATGTCCACCATTGAGAAGGACAAAGCTTCTAAGGTTAATCAGATGGTTGGCCCTGAAAATCAAAACTGCCCATTCTCTGTGACCTCACCTGGTAAGGCTGAACTAGATAATGGAATCACTCTTGATCTCCCCTGTGGTCTGGTTGTAGATTCTTCTATTACACTGATTGGAATCCCCAATGGACAAAACAGAAGCTTCCAGATTGGTCTTGCTGGGCAAGAGCGAGAAGCGGAGCCAAATCCTCCAGTTATCTTGCATTATAATGTTAGTCTTCCAGGAGAAAACATGACAGAGGAACCATATATTGTTCAAAATACATGGACTAGTGATTTAGGGTGGGGAAAAGAGGAAAGGTGTCCTGCACATGGTTCTGCCAACATCCAAGAAGTTGATGGACTTGTTCTCTGCAATGTGCAAGCAGTCAGAAGTAACACCAAAGGGAATGGAAATTTTGGTCAACCTGCTAGTATACCTTCTAATATTTCCTCAGAAAGAGCACATAGAAATGCTATTTTCCCCTTTGCTGAGGGAAATCCTTTCACTTCCACACTGTGGGTTGGTTCAGAGGGATTTCATATGACTGTGAATGGAAGGCATGAAACATCTTTTGCATATAGGGAGAACCTTGAACCGTGGTTAGTCAGCAGTATTAAAGTAGCAGGCAGTTTAAGTCTCTTATCAATCCTGGCTAAAGGTTTACCTGTTACTGAAGATAATGATATAGTTGTTGATGTTGAGAATCTGAAGGCTCCTTCTACCCCCAAAAAAAGGCTTATTTTGTTAATTGGAGTATTCTCTACTGGAAACAACTTTGAGCGTCGCATGGCCCTGAGGAGGTCTTGGATGCAATATGAGGCTGTACGTTCTGGAGAAGTTGCTGTCCGATTTTTCATTGGGCTTCACAAGAACAATAGGGTTAATTTTGAGTTATGGACTGAAGCTCAAGCATATGGAGATATTCAATTAATGCCTTTTGTAGATTACTATAGTTTGATTTCTTTGAAGACAATTGCAATTTGCATTATGGGGACAAAAATCATCCCTTCTAAATACATAATGAAAACAGATGATGATGCCTTTGTTAGGATTGATGAAGTGCTTTCCAGCCTTAAAGAAAAGCCATCCAAAGGCCTCTTATACGGTCTTATATCTTCTAAATCATCTCCTCAGAGGGATGAAGGCAGCAAGTGGTACATCAGTGAGGAGGAATGGCCACATGATACATACCCACTATGGGCACATGGTCCTGGCTATGTTATCTCTCGAGACATAGCAAAATTCGTTGTCAATGGCCACCAAGAAAGAAAACTCAAGCCCTTTAAATTGGAAGATGTTGCGATGGGCATATGGATTGAACAGTTCGCAAATGGTGGTAAAGAAGTGCGTTATATGAATGATGAGAGATTTTACAATGCCGGATGTGAATCAAATTATGTACTTGCCCATTATCAAAGCCCAAGAATGGTGTTGTGCCTTTGGGAGAAATTGCAGAAAGAACGCCAACCAGTATGCTGTGAGTAG 2028 0.4073 MEEFQCHPSSHPLSLSLTSNHHFNEKNYILVKGLLKMRKWYGGLLIIALGMMLFFVYNLKGIHSQKQSAKQSAYNFFNNHTPDDSIKQSSNLSVNSSEMELKRVPKPTRRPYLVHVAGLDDLYGMKNLSKGEMDSVLIWDSLRTLLSRSDALDGTAQGIKEASVAWKELMSTIEKDKASKVNQMVGPENQNCPFSVTSPGKAELDNGITLDLPCGLVVDSSITLIGIPNGQNRSFQIGLAGQEREAEPNPPVILHYNVSLPGENMTEEPYIVQNTWTSDLGWGKEERCPAHGSANIQEVDGLVLCNVQAVRSNTKGNGNFGQPASIPSNISSERAHRNAIFPFAEGNPFTSTLWVGSEGFHMTVNGRHETSFAYRENLEPWLVSSIKVAGSLSLLSILAKGLPVTEDNDIVVDVENLKAPSTPKKRLILLIGVFSTGNNFERRMALRRSWMQYEAVRSGEVAVRFFIGLHKNNRVNFELWTEAQAYGDIQLMPFVDYYSLISLKTIAICIMGTKIIPSKYIMKTDDDAFVRIDEVLSSLKEKPSKGLLYGLISSKSSPQRDEGSKWYISEEEWPHDTYPLWAHGPGYVISRDIAKFVVNGHQERKLKPFKLEDVAMGIWIEQFANGGKEVRYMNDERFYNAGCESNYVLAHYQSPRMVLCLWEKLQKERQPVCCE 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02089 675 FunFam Beta-1,3-galactosyltransferase GALT1 420 648 - -
Phco8g02089 675 Pfam Galactoside-binding lectin 209 398 IPR001079 GO:0030246
Phco8g02089 675 CDD GLECT 209 397 IPR001079 GO:0030246
Phco8g02089 675 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 366 623 IPR002659 GO:0006486|GO:0016020|GO:0016758
Phco8g02089 675 SUPERFAMILY Concanavalin A-like lectins/glucanases 209 400 IPR013320 -
Phco8g02089 675 Gene3D - 205 398 - -
Phco8g02089 675 SMART Gal_bind_lectin_2 212 399 IPR001079 GO:0030246
Phco8g02089 675 Pfam Galactosyltransferase 441 622 IPR002659 GO:0006486|GO:0016020|GO:0016758
Phco8g02089 675 Gene3D - 415 653 - -
Phco8g02089 675 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 208 400 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02089 Phco-Chr8 22333479 22340702 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02089 8 22333479 22340702 Phco8g02089 8 22333479 22340702 ECH
Phco8g02089 8 22333479 22340702 Phco4g01622 4 15917341 15921022 PCT