Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01622 ATGAAAAAGTTGTATGGAGGAGTTCTGGTTGCTTCACTGTTTATGTTGTTTATGCTTATGATCCTGCGAAATGGGATCATGAAAACTTCTATTGGTCAAGGTTATTTGACTATTCCTATCCTGGTTAATGGAACCAATCCTCTAGCATGGATAAATCCCACACTACCAGCTGCTATTCAAAATCCAGATGATCATTCTCAAGTTATTTCTTCTGATATTTTAGTATCTAGCCTCTTTGCTGGGAGCAACTTTTCCGAAGACGAGCAACAAGCTCTGCATACATGGAACCAATTGAACCACTTAATTGATCACACTCAGGGTTTACCCAGTGCAGCAGAAGCTATAAAGGAGGCTGCCAGTGCATGGAACTCTCTTATTTCCTCAATTGAAGAGCAAAAGCAAGGTCGTGCAAATGATAGTTCAAGAACTAAAGAGAAGCAGTGTCCCCACTTTCTTAATAAAATGAATTCCACTGAACTTGGTAACAGTAGTTACAAAATGCAAGTACCTTGTGGCCTGACACAAGGTTCTTCCATCACTGTAATTGGCATTCCGAACGGTCTTTTAGGTAATTTTCGGATTGACTTGACCGGAGAACCACTTCCTGGGGAACCCGATCCACCAATTATTTTACACTATAATGTTCGCCTGCATGGGGATAAAATCACTGAAGATCCAGTAATTGTCCAAAACACCTGGACTATAGCTCATGATTGGGGTGAGGAGGATCGTTGTCCATCCCCTACTTCTGAAAAGGTCGAAAAAGTTGATGAATTGGAGCAGTGTAATAAGATTGTAGGGAAGAACATTAGCCAACTTCACACAGCTGGGATGCATTCCCACACTTCAAGAGTATCTTTAACAACGGAAGAACAATCGATGAATAGGAAATACTTTCCTTTTAAGCAGGGTTACCCATTTGTTGCAACTTTAAGGGTGGGATCTGAGGGAATCCAGATGACAGTTGATGGAAAGCACGTAACTTCATTTGCTTTTCGTGAAACGTTGGAGCCATGGCTTGTCAGTGAAATAAAAATCTCAGGGGACCTCAAATTAATATCTATTCTTGCTAGTGGTCTGCCCACATCAGAGGATTCAGAGCATATTATTGACCTTGAATCATTGAAATCAAGTCCTATATCTGCACAGACCCCATTGGATCTCTTCATTGGTGTTTTCTCTACTGCTAACAATTTTAAGCGTCGAATGGCTGTTAGAAGAACCTGGATGCAGTACAATGCTGTTCGATCAAATATGACAGCTGTGCGCTTCTTTGTTGGTTTGCATAAAAGCCCAATAGTTAATGAAGAGCTGTGGAGGGAAGCACAAACTTATGGAGACGTGCAGCTGATGCCATTTGTTGACTACTACAGCCTCATCACCTGGAAAACTTTGGCAATCTGCATTTTTGGGACACAAGTTTCGGCAAAGTTTGTCATGAAGACGGATGATGATGCGTTTGTCCGGGTAGATGAAGTTCTAGACTCTTTGCACAGGATCAATGTTGATCATGGGTTACTGTTTGGACTCATCAATTCGGATTCCAGACCTCATCGAAATACAGATAGCAAATGGTACATCAGCCCAGAGGAATGGAGCGAAGGAACTTATCCTCCTTGGGCACATGGTCCAGGCTATGTGGTCTCAAACGATATAGCAAGAACGGTTGCCAAGAAATTCAGAGAGAACCATTTGAAGATGTTTAAATTAGAAGACGTTGCAATGGGAATTTGGATTGCAGACATGAAGAAGGAAGGTGTAGATGTTCGGTGTGAGAATGAGGACAGAGTGTACCCTGAGGGTTGTAAGGATGGTTATGTGGTTGCCCATTACCAGGGCCCTAGGGAGATGCTCTGTTTGTGGCAGAAACTTGAAGAAGGAAAAGGTGCAAAATGCTGTGGTGATAGGAAATGA 1914 0.4216 MKKLYGGVLVASLFMLFMLMILRNGIMKTSIGQGYLTIPILVNGTNPLAWINPTLPAAIQNPDDHSQVISSDILVSSLFAGSNFSEDEQQALHTWNQLNHLIDHTQGLPSAAEAIKEAASAWNSLISSIEEQKQGRANDSSRTKEKQCPHFLNKMNSTELGNSSYKMQVPCGLTQGSSITVIGIPNGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLHGDKITEDPVIVQNTWTIAHDWGEEDRCPSPTSEKVEKVDELEQCNKIVGKNISQLHTAGMHSHTSRVSLTTEEQSMNRKYFPFKQGYPFVATLRVGSEGIQMTVDGKHVTSFAFRETLEPWLVSEIKISGDLKLISILASGLPTSEDSEHIIDLESLKSSPISAQTPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRSNMTAVRFFVGLHKSPIVNEELWREAQTYGDVQLMPFVDYYSLITWKTLAICIFGTQVSAKFVMKTDDDAFVRVDEVLDSLHRINVDHGLLFGLINSDSRPHRNTDSKWYISPEEWSEGTYPPWAHGPGYVVSNDIARTVAKKFRENHLKMFKLEDVAMGIWIADMKKEGVDVRCENEDRVYPEGCKDGYVVAHYQGPREMLCLWQKLEEGKGAKCCGDRK 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01622 637 CDD GLECT 165 355 IPR001079 GO:0030246
Phco4g01622 637 Pfam Galactosyltransferase 400 583 IPR002659 GO:0006486|GO:0016020|GO:0016758
Phco4g01622 637 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 325 593 IPR002659 GO:0006486|GO:0016020|GO:0016758
Phco4g01622 637 Pfam Galactoside-binding lectin 165 356 IPR001079 GO:0030246
Phco4g01622 637 FunFam Beta-1,3-galactosyltransferase GALT1 379 607 - -
Phco4g01622 637 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 165 358 IPR001079 GO:0030246
Phco4g01622 637 Gene3D - 378 595 - -
Phco4g01622 637 Gene3D - 156 356 - -
Phco4g01622 637 SMART Gal_bind_lectin_2 169 357 IPR001079 GO:0030246
Phco4g01622 637 SUPERFAMILY Concanavalin A-like lectins/glucanases 165 358 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01622 Phco-Chr4 15917341 15921022 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01622 4 15917341 15921022 Phco4g01622 4 15917341 15921022 ECH
Phco8g02089 8 22333479 22340702 Phco4g01622 4 15917341 15921022 PCT