Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01990 ATGCCAATGGCCGCCGATCGTTTGACCCGTGTTCACAGTCTCCGTGAGAGGCTTGATGAAACCCTGTCTGCTAACAGGAACGAAATTCTGGCCCTTCTGTCAAGGATAGAAGCTAAGGGCAAGGGGATCTTGCAACACCATCAGGTCATTGCTGAGTTCGAGGAAATTCCCGAGGAGAGCAGACAGAAGCTTATTGATGGTGCCTTTGGAGAAGTTTTGAGATCTACTCAGGAAGCCATAGTTTTGCCACCATGGGTTGCTCTGGCTGTTCGTCCAAGGCCTGGTGTCTGGGAGTACCTGAGAGTGAATGTGCACGCTCTAGTTGTTGAGGTGTTGCAACCTGCTGAGTACCTGCGCTTCAAGGAGGAACTTGTTGATGGAAGTTCTAATGGAAACTTTGTGCTTGAGTTGGACTTTGAACCCTTTACGGCATCCTTCCCCCGCCCAACTCTTAACAAGTCAATTGGAAATGGTGTGCAGTTCCTCAACCGCCACCTTTCTGCCAAACTCTTCCATGACAAGGAGAGCTTGCTCCCACTTTTGGAATTCCTCAGGCTTCACAGCGTCAACGGAAAGACTTTGATGTTGAATGACAGAATTCAAAACCCTGATGCTCTTCAACATGTTCTGAGGAAGGCTGAGGAGTATCTGGGCACAGTGCTTCCTGAAACCCCCTACTCGGAATTTGAGCACAAGTTTCAGGAAATTGGTTTGGAGAGAGGGTGGGGTGAGAACGCAGAGCGTGTACTTGAGTCAATTCAACTTCTCTTGGATCTTCTTGAGGCCCCTGATCCGTGCACCCTTGAGACTTTCCTTGGAAGAATCCCTATGGTCTTTAATGTTGTTATTCTTTCTCCCCATGGTTACTTTGCCCAAGATAATGTCTTGGGATACCCTGACACTGGTGGTCAGGTTGTTTACATCTTGGATCAAGTCCGTGCTTTGGAGAATGAGATGCTCCATCGCATTAAGCAACAAGGATTGGACATTGTTCCTCGTATTCTTATTATCACCCGTCTTCTCCCAGATGCAGTAGGTACTACTTGTGGCCAACGTCTTGAGAAGGTGTTTGGAACTGAACACTCCCACATTCTTCGAGTTCCCTTTAGAACTGAGAAGGGGATTGTTCGCAAGTGGATCTCAAGATTTGAAGTCTGGCCCTACTTGGAAACTTACACCGAGGATGTTGCTCATGAGCTTGCCAAAGAGTTGCAAGGCAAGCCAGATCTGATCGTTGGAAACTACAGTGATGGAAACATTGTTGCCTCTTTGTTGGCCCATAAACTAGGAGTCACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAATACCCTGAATCCGACATTTACTGGAAAAAATTGGAAGAGAGATACCATTTCTCTTGCCAATTCACAGCTGATCTATTTGCCATGAACCACACAGATTTCATTATCACCAGTACATTCCAAGAAATTGCTGGAAGCAAGGACACTGTCGGACAGTATGAGTCTCACACAGCCTTCACCCTTCCTGGACTCTACCGTGTTGTGCATGGTATTGATGTCTTCGATCCAAAATTCAACATTGTCTCTCCCGGAGCTGATCAGACCATTTACTTCTCCCACACCGAAACTAGCCGTAGGTTGACCTCCTTCCACCCCGAAATCGAAGAGCTTCTTTACAGCTCAGTCGAGAATGAAGAACACATATGTGTGCTGAAGGACCAGACGAAGCCAATTATCTTCACCATGGCAAGGTTGGACCGTGTGAAGAACATCACAGGACTTGTGGAGTGGTATGGGAAGAATGCGAAGCTGAGGGAGTTGGTGAACCTTGTGGTTGTTGCTGGAGACAGGAGGAAGGAGTCGAAGGACTTGGAAGAGAAGGCCGAGATGAAGAAGATGTACAGCCTCATTGAGACCTACAAGTTGAACGGCCAATTCAGATGGATTTCCTCTCAGATGAACCGTGTGAGGAATGGAGAGCTGTACCGTGTGATCTGTGACACCAAGGGAGCCTTTGTGCAGCCTGCAGTGTATGAGGCTTTTGGTTTGACAGTGGTTGAGGCCATGACTTGTGGGTTGCCAACATTTGCCACATGCAATGGTGGTCCTGCTGAGATCATTGTTCATGGAAAATCTGGCTTCCACATTGATCCCTACCATGGTGACCGTGCTGCTGACCTCCTTGTTGAGTTCTTTGAGAAGTGCAAGGTTGACCCATCTCACTGGGACACCATCTCTCAAGCTGGTCTCCAACGTATTGAAGAGAAGTACACATGGCAAATTTACTCCCAGAGGCTTCTCACCCTCACTGGTGTCTATGGTTTCTGGAAGCATGTGTCTAACCTTGATCGCCTCGAGAGTCGCCGCTATCTTGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCTGAGTCTGTGCCCCTTGCTGTTGAGTAA 2424 0.4777 MPMAADRLTRVHSLRERLDETLSANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEESRQKLIDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEVLQPAEYLRFKEELVDGSSNGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLLPLLEFLRLHSVNGKTLMLNDRIQNPDALQHVLRKAEEYLGTVLPETPYSEFEHKFQEIGLERGWGENAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHSHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFSHTETSRRLTSFHPEIEELLYSSVENEEHICVLKDQTKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYSLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKCKVDPSHWDTISQAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01990 807 FunFam Sucrose synthase 282 558 - -
Phco8g01990 807 FunFam Sucrose synthase 148 277 - -
Phco8g01990 807 NCBIfam sucrose synthase 26 804 IPR012820 GO:0005985|GO:0016157
Phco8g01990 807 Pfam Sucrose synthase 10 555 IPR000368 GO:0005985|GO:0016157
Phco8g01990 807 Gene3D - 148 277 - -
Phco8g01990 807 Gene3D Glycogen Phosphorylase B; 529 755 - -
Phco8g01990 807 Gene3D - 27 147 - -
Phco8g01990 807 PANTHER - 9 805 IPR012820 GO:0005985|GO:0016157
Phco8g01990 807 Pfam Glycosyl transferases group 1 565 729 IPR001296 GO:0016757
Phco8g01990 807 Gene3D Glycogen Phosphorylase B; 282 798 - -
Phco8g01990 807 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 297 765 - -
Phco8g01990 807 FunFam Sucrose synthase 13 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01990 Phco-Chr8 21266285 21270327 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01990 8 21266285 21270327 Phco8g01990 8 21266285 21270327 ECH
Phco8g01990 8 21266285 21270327 Phco7g02648 7 45386526 45391085 PCT