Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02648 ATGTTGGAGAGTTTTCTGGTTCTGTTCTGGGGTGCTGTCTATCATGAGCTTTGGCTCAGTTTCTTAGGAATTTCCATTCTCAAGCTTGGTTTTTCTTTTATGACAGTTCAGTTTGAAGTCTTGTCCCTGAAGATGGCACATCATCCATTGACGCACTCTCACTCTTTCCGGGAGAGGATTGATGAAACTCTCTTGGGTAACAGGAATGAAATTTTGGCCCTTCTGTCAAGGCTTGAAGGCAAGGGCAAGGGAATCCTGCAACACCACCAGATCATTGCAGAGCTTGAAGAAATCCCCGAGGAGAACAGGAAGAAGCTACAGGATGGGTCCTTTGGAGAAGTTTTGAGATCTACACAGGAAGCCATAGTGCTGCCACCTTTTGTTGCTCTGGCTGTTCGACCAAGGCCTGGTGTTTGGGAGTATCTGCGTGTGAATGCGCACGTGCTTGCTGTTGATGAGCTACGTCCTGCTGAGTATCTGCGTTTCAAGGAGGAGCTTGTTGAGGGAAGTTCTAATGGCAACTTTGTGCTTGAGTTGGACTTTGAACCATTTAATGCGTCTTTCCCTCGTCCAACTCTGAACAAGTCCATTGGGAATGGCGTGGAGTTCCTTAACCGCCATCTTTCAGCCAAACTCTTCCATGACAAGGAGAGCATGCAGCCACTGCTTGAATTCCTCAGGCTTCACAGTTATAAGGGCACGACTATGATGCTGAATGACAAAGTTCAGAACCTGAATTCTCTCCAACATGTTTTGAGAAAAGCAGAAGAGTATCTAACTTCGATTGCTCCTGCAACGCCCTACTCAGAATTTGAATACAGATTCCGGGAGATTGGTTTGGAGAGGGGGTGGGGTGACACCGCCGAGCGTGTCATCGAGATGATCCAGCTTCTCTTGGATCTTCTGGAGGCACCTGACCCTTTCACCCTTGAGACATTCCTTGGAAGAGTCCCTATGGTCTTCAATGTTGTTATCCTTTCTCCCCATGGTTACTTTGCCCAAGATAATGTCTTGGGATACCCTGACACTGGTGGACAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGAATGAGATGCTCAACCGCATCAAGAAACAAGGCTTGGATATCACTCCTCGTATTCTCATTATCACTCGTCTTCTCCCTGATGCAGCAGGAACTACCTGTGGCCAACGTCTAGAGAGGGTATATGATACTGAATATTGTGACATTCTCCGAGTTCCTTTCAGAACAGAGGAGGGAATTGTTCGCAAATGGATCTCAAGATTCGAAGTCTGGCCATACCTAGAGACTTATGCTGAGGATGTTGCTGTTGAACTTGGTAAGGAGTTGCAAGCCAAGCCAGATCTGATTGTTGGAAACTACAGTGATGGAAACATTGTTGCCTCTTTGTTAGCACATAAATTAGGAGTAACTCAGTGTACCATTGCTCATGCTCTAGAAAAGACCAAATACCCTGAGTCTGACATTTACTGGAAAAAATTTGAAGAGAAATATCACTTTTCATGCCAATTTACTGCTGATCTTTTTGCAATGAACCACACAGACTTTATCATCACTAGCACCTTCCAAGAGATTGCTGGGAGCAAGGATACTGTTGGACAGTACGAGAGTCACACTGCCTTCACCCTTCCTGGTCTTTACCGAGTTGTTCATGGTATTGATGTCTTTGATCCAAAGTTCAACATTGTCTCTCCAGGAGCTGATATGGGCATATACTTCCCATACACCGAAACTGAGCGTAGGTTAACAAATTTCCACCCTGAGATTGAAGAGCTTCTTTACAGCTCAGTGGAGAATGAGGAACACATATGTGTCTTGAAGGACCGCAACAAGCCAATCATCTTCACCATGGCAAGACTTGACCGTGTGAAGAACATCACAGGACTTGTTGAATGGTACGGCAAGAACGCTCGCCTCCGTGAGTTGGTGAACCTTGTTGTTGTTGCTGGAGACAGGAGGAAGGAGTCCAAGGACTTGGAAGAGAAGGCTGAGATGAAGAAGATGTATGGCCTCATTGAGACCTACAAGTTGAATGGCCAATTCAGATGGATCTCCTCTCAGATGAACAGAGTTAGAAATGGAGAGCTCTACCGTGTCATTTGTGACACAAAGGGTGCCTTTGTGCAGCCTGCAGTTTATGAAGCTTTTGGGTTGACTGTGGTTGAAGCCATGACCTGTGGATTGCCAACATTTGCCACATTCAATGGTGGTCCTGCTGAGATCATTGTGGATGGAAAATCTGGATACCACATTGACCCCTACCATGGCGACCGTGCTGCTGAGATCCTTGTTGACTTCTTTGAGAAGAGCAAAGCAGACCCATCTCACTGGGACAAAATCTCCCAGGGAGGACTCAAGCGTATTCAGGAGAAGTACACATGGCAGATCTACTCTGACAGGCTCTTGACACTCACGGGTGTCTATGGCTTCTGGAAGCATGTGACCAACCTTGAACGCCGTGAGAGCAAACGTTACCTGGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCCGAGTCAGTTCCCCTTGCCATTGAAGAGTAA 2553 0.4638 MLESFLVLFWGAVYHELWLSFLGISILKLGFSFMTVQFEVLSLKMAHHPLTHSHSFRERIDETLLGNRNEILALLSRLEGKGKGILQHHQIIAELEEIPEENRKKLQDGSFGEVLRSTQEAIVLPPFVALAVRPRPGVWEYLRVNAHVLAVDELRPAEYLRFKEELVEGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHDKESMQPLLEFLRLHSYKGTTMMLNDKVQNLNSLQHVLRKAEEYLTSIAPATPYSEFEYRFREIGLERGWGDTAERVIEMIQLLLDLLEAPDPFTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLNRIKKQGLDITPRILIITRLLPDAAGTTCGQRLERVYDTEYCDILRVPFRTEEGIVRKWISRFEVWPYLETYAEDVAVELGKELQAKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMGIYFPYTETERRLTNFHPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATFNGGPAEIIVDGKSGYHIDPYHGDRAAEILVDFFEKSKADPSHWDKISQGGLKRIQEKYTWQIYSDRLLTLTGVYGFWKHVTNLERRESKRYLEMFYALKYRKLAESVPLAIEE 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02648 850 Pfam Glycosyl transferases group 1 608 782 IPR001296 GO:0016757
Phco7g02648 850 Gene3D Glycogen Phosphorylase B; 571 797 - -
Phco7g02648 850 FunFam Sucrose synthase 324 586 - -
Phco7g02648 850 FunFam Sucrose synthase 55 189 - -
Phco7g02648 850 PANTHER - 51 849 IPR012820 GO:0005985|GO:0016157
Phco7g02648 850 Gene3D - 69 189 - -
Phco7g02648 850 Gene3D - 190 319 - -
Phco7g02648 850 NCBIfam sucrose synthase 68 846 IPR012820 GO:0005985|GO:0016157
Phco7g02648 850 Gene3D Glycogen Phosphorylase B; 324 840 - -
Phco7g02648 850 FunFam Sucrose synthase 190 319 - -
Phco7g02648 850 Pfam Sucrose synthase 53 597 IPR000368 GO:0005985|GO:0016157
Phco7g02648 850 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 339 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02648 Phco-Chr7 45386526 45391085 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02648 7 45386526 45391085 Phco7g02648 7 45386526 45391085 ECH
Phco8g01990 8 21266285 21270327 Phco7g02648 7 45386526 45391085 PCT