Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01939 ATGGGAGACATGGGAAAAATGGGACTTGACCCGATTTGTTGTGGACCCGGTATAGGCTTCTTTGTTTGTTTGCTCTTGTATGTTCAGTTGGCACAGATGACTGGAATATCTAAGGAAGAAGGGTCGGCTAGTCCTAGTTGGGGTGCTTCATTTTTTATGCAGACAAAAGAGGACGTGGCTAGGGCTGTTGCTGCTGCTGTTAACTCTCCCATGTCATCAAAAGATGATCATAGTGGTAGCCAACTTCAAAGGCTTCAGTATCAAGTTACTCGAATGTTGAAAGGCTTTTCACAGCCTCCTGATGTTGAAAACACAAATTACAATCCTGAAATCCTGACTAGTCTGAAGCGTCAGTGGGCTGCAAACTTTCAGTTGCAGTATATGGACCATAAGACTTGGAAGGAACCCTCACGACTATTTGAGAGCATGGTGATTGTTGGACTTCATCCTAATTGTGATGTTCAGGCACTGCAAAGGCGATATGTTGATAGGAAGTTTGAAGGCTCTGCTAAATTGAGAAGTGCACTTGGTTATCAGAGTCAATCTTGTGTAGAACCCAACATTGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAATGCAAAGACCTTCTTTCTTTCTGCTTCCCGGGAGGCTTAGAGGTCGGTGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAATGAAATTCTTTTTGGGCAGGAACACCTTAAACAAAGGGATTTGTCATTTGTATTCAGGTTACAGGGTGCTGACAACTCAACACTTTATGGGTGTTGTGTCTTAGTTGAAGAACTAGTGGAAAAGCCTTCTGGATTGCTTTCTCTGATTTCTGATAAGCAGCCATCTTACTCGTCTTTGAGACGACATATACTAACCACTCAGAGATGCTACTGCATTCTTTCAAGGCTTCCAGCTTTTGAATTGCACTTTGGTGTATTGAATAGCATCTTCACACAAGAAAGGCTAGAGCGGTTGACAAGAAGTGTTGGAGATCTAAATTTAGAATATGATGAAGGTAATAACTTTAAGGAAGAAAATTCAGAGGGCTACTCAGAGAGTGCTTTGGTGAGTGATGGACCAATAGAAGATAGACTTGGTGGAAATCCAAGAATTTCTCCATTGAGAGCAGTAAAGTCTACACCTGAAAACATTGTGGATGATGGTCAACCAGAGCACCTAATGGTTGATGGGGAGCTGCCGACATATAAGGAGAGAATCACTTATGATGATGTTTTGCTTGCTAATCCTGTAACAGATAGTACAACAACCAAAGAAGATTCTGGCCCTACAAATTCTGAAAATAATGATCAGTATGGAGATGCCTTTTCTACAAACAAACAGTCAGAAGACAAACATTTTCCTAATGCTATTTTGCCCCTCCTGCGCTATTGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAAGGATCACCTTGTGAGGACAGAAATTTTAGGAGTGATGTTGATGATAATGAGACAGAAGAAGCATCTTTCTCCGGCCAAGATGATTTAAATGACTTAAATGATATTCTTGAATGGGCAAAGAAAAATAACCATGGACCACTTCAAATTATAAGTGAGTATTACCGTTTAAGTTACCCTGCCAGGGGCTCATCACTTACATTTCATCCTTTGGAACACTTGCATCCCTTGGAATATAAGAGATCAGCTGAGTCATTTCTACGTCTTGCTGGCTCAACAGTTGTTTTGAAAACGCACAGTACTGGTCTGGAATTAGTTGATGCACATATTGCTCTCGTGGTGGAAGAGGCAAATGCATTATCTGAATGGGCTGTAGCTTGCTTGTGCGGTACATTGAGACTTGAAAATGTGTTAACGTTCTTTGCAGGAGTTCTACTAGAGAAGCAGATAGTTGTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCCCTAATCCAGCCTTACCGGTGGCAAAGCCTGCTGATGCCAGTTTTACCAAATGACATGCTTGACTTTTTAGATGCACCTGTCCCTTATGTAGTTGGTATCAGGAACAAGACCAGTGAAGTTCAGTCAAAGTTTAACAATGTTATTCTAGTTGATGCCGATAGGAACCAGGTGAAATCACCAACAATACCACAACTGCCAAGACAGAAAGAGCTAGTCTCTTCTTTACGTCCTTATCATTCAACTCTTGTAGGAGAAAGTTACTTGGGTAGGAGAAGGCCAGTATATGAATGCACGGAAGTGCAGATTGAAGCTGCAAAGGGGTTCCTTTCGGTGTTAAGATCTTACTTAGATTCTCTTTGCTATAACATCCGTTCTCACACGATCACTAATGTACAATCCAATGACGATAAGGTATCATTGCTTCTGAAGGAGAGTTTCATTGACTCATTCCCTTACCGGGATCGGCATTTTATGAAGCTTTTCGTGGATACACAGCTTTTTTCTGTACATACAGATCTTGTTCTCTCTTTCTTACAAAAGGAATAG 2496 0.4127 MGDMGKMGLDPICCGPGIGFFVCLLLYVQLAQMTGISKEEGSASPSWGASFFMQTKEDVARAVAAAVNSPMSSKDDHSGSQLQRLQYQVTRMLKGFSQPPDVENTNYNPEILTSLKRQWAANFQLQYMDHKTWKEPSRLFESMVIVGLHPNCDVQALQRRYVDRKFEGSAKLRSALGYQSQSCVEPNIEPQVLFVYPPEKQLPLKCKDLLSFCFPGGLEVGAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVEKPSGLLSLISDKQPSYSSLRRHILTTQRCYCILSRLPAFELHFGVLNSIFTQERLERLTRSVGDLNLEYDEGNNFKEENSEGYSESALVSDGPIEDRLGGNPRISPLRAVKSTPENIVDDGQPEHLMVDGELPTYKERITYDDVLLANPVTDSTTTKEDSGPTNSENNDQYGDAFSTNKQSEDKHFPNAILPLLRYCQYESSESSCSFQGSPCEDRNFRSDVDDNETEEASFSGQDDLNDLNDILEWAKKNNHGPLQIISEYYRLSYPARGSSLTFHPLEHLHPLEYKRSAESFLRLAGSTVVLKTHSTGLELVDAHIALVVEEANALSEWAVACLCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSASVLSVIPLIQPYRWQSLLMPVLPNDMLDFLDAPVPYVVGIRNKTSEVQSKFNNVILVDADRNQVKSPTIPQLPRQKELVSSLRPYHSTLVGESYLGRRRPVYECTEVQIEAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRHFMKLFVDTQLFSVHTDLVLSFLQKE 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01939 831 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 73 821 - -
Phco8g01939 831 MobiDBLite consensus disorder prediction 349 380 - -
Phco8g01939 831 Gene3D - 127 336 - -
Phco8g01939 831 ProSiteProfiles Tripartite DENN domain profile. 170 831 IPR037516 -
Phco8g01939 831 MobiDBLite consensus disorder prediction 424 455 - -
Phco8g01939 831 Pfam DENN (AEX-3) domain 564 705 IPR001194 -
Phco8g01939 831 Pfam uDENN domain 190 267 IPR005113 -
Phco8g01939 831 Gene3D - 599 767 IPR043153 -
Phco8g01939 831 SMART uDENN_cls 136 269 IPR005113 -
Phco8g01939 831 MobiDBLite consensus disorder prediction 478 508 - -
Phco8g01939 831 SMART DENN_cls 298 705 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01939 Phco-Chr8 20537135 20550639 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01939 8 20537135 20550639 Phco8g01939 8 20537135 20550639 ECH
Phco8g01939 8 20537135 20550639 Phco7g02689 7 45858102 45869600 PCT