Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02689 ATGTTATTATTATATGAAGAGAAAAACAAAAGAAGAAGAAGATTGGTAACAAGAGAGGAGAATCTGGAAGTGCAGGCCTTAATCCCTTCCCTTGCCCCACTTTTTCTTCAAAGCCTTTATCTCTGCCTCAACCCCCTCTCTTTTCTATTGTTTCCTTTATTACGCTATTTCGTGGAGCAAATGACTGGAATGTCAAAGGAGGAAGTGTCTGGTAGTCCTAGATGGGGTGCTTCAATTATTATGCAGACAACAGAGGATGTGGCTAGAGCTGTTGCTGCTGCTGTTAATTCTCCAAGGCCATCTGTTATATATTCATCAAAAAATGATCAAAGTGGCAATCAACTTCAAAGACTGCAGTATCAAGTTTCAAAAATGTTAAAAGGATTTTCTCGCCCCCCTGAAGTTAAATATAATAATTACAATCCGGAAATCCTGACAACTCAGAAGCGTCAATGGGCTGCAAACTTTCAGTTACAGTACATGGACCATAAGTCATGGAAGGAGCCAACAAAGCTGTTTGAAAGTATGGTGGTTGTTGGACTTCATCCTAATTGTGATATTCAGGCACTGCAAAGGCTACATTTCTTAAGAAAGTCTGAAGGCCCTGGTAAATTAAGAAGTGCTCTTGGTTATCAGAATCAATCCCGTGTGGAGCCTAGTCTCGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAAGACAAGGATCTTCTCTCTTTCTGCTTCCCTGGAGGCTTGGAGGTTAATGCTGTCGAGAGAACACCTTCCATGAGTGAATTGAATGAAATTCTTTTTGGGCAGGAACACCTTAAACAAAGGGATCTGTCTTTTGTATTTAGGCTACAGGGTGCTGATAATTCAACTCTTTATGGGTGCTGTGTCTTAGTTGAAGAGTTAGTGCAAAAACCCTCTGGATTGCTCTCCCTGATTTCTGATAAACAGTCGAGTTATTCTCCTCTGAAACGTGAACGCCATATATTAACTACACAAAGATGTTATTGCATTCTCTCAAGGCTCCCATTCTTTGAATTGCACTTTGGTGTATTGAACAGCATCTTCATGCAAGAACGACTAGATCGGTTGACGAAAAACATTGGAGATTTAAATTTAGAATATGTTGAAGGTAGCTGTGAGGAAGAAAATTTTGGTGAAGATTCAGAGTGCATGTTGGTGAATGATAGATTAGAAGATAGACATGATGACAGTCCAATGATTTCTCAATCAAGCCTAAGAAATTCCTCACCAGAAATCATTGAGGATCATAGTAATTATCCCAATAAACAAATAGTTAATGGGGAGGTGCATATATTTAACGATGAGCCTTGTGATCCTGAAAATGATAGAAAAACTGTTAATGAAGAATCTGGCCCTACAAATGCTGATGATAATGATTTGTATGGAGAAGCTTTTGTAACAAATAAACAGTCAGAAGATAGGCGTTTACCCAATGCTATTCTACCACTCTTGCGGTATTGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAGGGTTCTCCTTGTGATGAAAGGAATTTCAGGAGTGATGCTGATGATACTGAGACAGAAGATGCTTCATTCTCTGGCCAGGAGGATTTGAATGACCTAAATGGTATTCTTGAGTGGGCTAAGGCAAATAACTGTGGATTATTACAGATTGTAAGTGAGTATTATTGCTTAAGTTGTCCTTCAAGGGGCAAATCACTTAGGTTTCATCCTTTGGAACACCTGCATCCCTTAGAATATCACAGACCAGATGAGGCAATTCTACATCTTGCTGGTTCAACTGTTGATTTGAAATCTTTCAGTACAGGTCTGGAATTAGCAGAGGCTCATAATTCTCTTCTGGCTGAGGAGGAGGCAACTGCATTATCTACATGGGCTGTAGGGTGCATGTGTGGTACATTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGCTCTACTGGAGAAGCAGATAGTTTTTGTCTGTTCTAATTTGGGAATCCTATCTGCATCAGTTTTATCAGTTATTTCACTAATCCGGCCCTACCAATGGCAAAGCTTGCTAATGCCGGTTCTACCAAATGACATGCTTGAGTTTCTGGATGCTCCTGTCCCTTACATAGTTGGTATAAAAAACAAGACCAGTGAAGTTCAGTCAAAGTTAACTAATAATGTTATCCTGGTCGACGTCAACAGGAATCAGGTGAAGTCATCAACAATACCTCACCTGCCAAGGCAGAAAGAGTTAATGGCTTCTTTACGCCCTTATCATGCAACTCTCGTGGGAGAAAGTTACTTGGGTATGAGAAGGCCAGTATATGAATGCACAGAAGTGCAGGTAGAAGCTGCTAAGGGATTCTTATCGGTGTTAAGGTCTTATTTGGATTCCCTTTGCCATAATATTCGTTCGCATACAATAACCAATGTACAATCCAATGATGATAAGGTATCCTTGCTTTTGAAGGAGAGTTTCATCGACTCATTTCCTTCTCGTGATAGGCCTTTCATGAAGCTTTTCGTGGATACACAGCTCTTCTCTGTGCACACAGATCTTGTTCTCTCTTTCTTCCAAAAGGAATAG 2583 0.4015 MLLLYEEKNKRRRRLVTREENLEVQALIPSLAPLFLQSLYLCLNPLSFLLFPLLRYFVEQMTGMSKEEVSGSPRWGASIIMQTTEDVARAVAAAVNSPRPSVIYSSKNDQSGNQLQRLQYQVSKMLKGFSRPPEVKYNNYNPEILTTQKRQWAANFQLQYMDHKSWKEPTKLFESMVVVGLHPNCDIQALQRLHFLRKSEGPGKLRSALGYQNQSRVEPSLEPQVLFVYPPEKQLPLKDKDLLSFCFPGGLEVNAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGLLSLISDKQSSYSPLKRERHILTTQRCYCILSRLPFFELHFGVLNSIFMQERLDRLTKNIGDLNLEYVEGSCEEENFGEDSECMLVNDRLEDRHDDSPMISQSSLRNSSPEIIEDHSNYPNKQIVNGEVHIFNDEPCDPENDRKTVNEESGPTNADDNDLYGEAFVTNKQSEDRRLPNAILPLLRYCQYESSESSCSFQGSPCDERNFRSDADDTETEDASFSGQEDLNDLNGILEWAKANNCGLLQIVSEYYCLSCPSRGKSLRFHPLEHLHPLEYHRPDEAILHLAGSTVDLKSFSTGLELAEAHNSLLAEEEATALSTWAVGCMCGTLRLENVLTFFAGALLEKQIVFVCSNLGILSASVLSVISLIRPYQWQSLLMPVLPNDMLEFLDAPVPYIVGIKNKTSEVQSKLTNNVILVDVNRNQVKSSTIPHLPRQKELMASLRPYHATLVGESYLGMRRPVYECTEVQVEAAKGFLSVLRSYLDSLCHNIRSHTITNVQSNDDKVSLLLKESFIDSFPSRDRPFMKLFVDTQLFSVHTDLVLSFFQKE 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02689 860 MobiDBLite consensus disorder prediction 504 534 - -
Phco7g02689 860 Pfam DENN (AEX-3) domain 614 733 IPR001194 -
Phco7g02689 860 SMART DENN_cls 333 734 IPR001194 -
Phco7g02689 860 Gene3D - 629 796 IPR043153 -
Phco7g02689 860 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 105 856 - -
Phco7g02689 860 Pfam uDENN domain 223 300 IPR005113 -
Phco7g02689 860 ProSiteProfiles Tripartite DENN domain profile. 207 860 IPR037516 -
Phco7g02689 860 Coils Coil 5 25 - -
Phco7g02689 860 Gene3D - 160 371 - -
Phco7g02689 860 MobiDBLite consensus disorder prediction 444 460 - -
Phco7g02689 860 MobiDBLite consensus disorder prediction 444 470 - -
Phco7g02689 860 SMART uDENN_cls 169 302 IPR005113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02689 Phco-Chr7 45858102 45869600 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02689 7 45858102 45869600 Phco7g02689 7 45858102 45869600 ECH
Phco8g01939 8 20537135 20550639 Phco7g02689 7 45858102 45869600 PCT