Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01924 ATGGCTTCTATTAGCGCCACCACTTTGGTTTTCGCGTCAGATTTAATTGAATTTTATTATCACTACGAAGCCAAAATGCTTACGTGCATAGCTCGTCCGAAGAAACCTGATGAGTCGGATCCGAACAGCGGGACAAGCGCTGCTAAATCGCAAGCCGTCAAATCCCTCACCTCTCAGATAAGGGATATGGCGTTGAAGGCTTCGGGAGCGTACAAGCATTGCGCTCCGTGCACGGGGCCAGCGGCTCAGGGGCGAGTGCGGACCAACACCGAGTCGGACGCGGACTCAGACCGGTTCCGGTGGTCGTACCGGCGGACAGGGAGTTCGAGCTCGACGACGACTCGGACGTGGGGGAAGGAGATGGAGGCGCGGCTGAAGGGAATATCGAGCGGCGAGGGGACGCCGAACTCCGCGAGCGGCCGTCGAGCGGAGCCGTTGGTGCTGTTCGTCGAAGAGAACGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCTGGCGTTTTGATTACGTTCGTGTCGTTGCCACGTGGCGGTAATGATCTCAAACGCATACGATTCAGTCGAGAGATGTTCAATAAATGGCAAGCACAAAGGTGGTGGGCAGACAACTACGATAAAGTTATGGAGCTTTACAATGTTCAAAGGTTTAGCCGCCAAGCATTCCCTCTTCCGACGCCACCAAGATCTGAAGATGAGAGCACAAAGCTTGAATCAGCAGAAGCCAGTCCTGTAACTCCTCCACTGACCAGGGAACGGTTACCTCGTAATATTTACCGTCCAACAGGGATGGGAATGGGATACTCATCCTCAGATTCCTTTGATCATCAGTCAATGCAATCCCGGCATTTCTACGACTCAAATGGTTTGAACTCTACCCCAAAAGTGTCCACTATTAGTGCGGCCAAGACGGAGATATCATCAATGGATGCTTCTATCAGAAGTAGCTCATCCAGAGAGGCTGATCGCTCGGGTGATTTATCAATCAGCAATGCTAGTGATTTGGAGACTGAGTGGGTTGAACAGGATGAACCTGGGGTTTACATTACAATCAGAGCATTGCCAGGTGGCGCAAGGGAGCTCAAACGAGTCAGATTCAGCCGAGAAAAATTTGGAGAGATGCATGCTAGATTATGGTGGGAGGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1173 0.5192 MASISATTLVFASDLIEFYYHYEAKMLTCIARPKKPDESDPNSGTSAAKSQAVKSLTSQIRDMALKASGAYKHCAPCTGPAAQGRVRTNTESDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRAEPLVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWADNYDKVMELYNVQRFSRQAFPLPTPPRSEDESTKLESAEASPVTPPLTRERLPRNIYRPTGMGMGYSSSDSFDHQSMQSRHFYDSNGLNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDLSISNASDLETEWVEQDEPGVYITIRALPGGARELKRVRFSREKFGEMHARLWWEENRARIHEQYL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01924 390 ProSiteProfiles BRX domain profile. 335 390 IPR013591 -
Phco8g01924 390 ProSiteProfiles BRX domain profile. 156 211 IPR013591 -
Phco8g01924 390 MobiDBLite consensus disorder prediction 221 252 - -
Phco8g01924 390 PANTHER PROTEIN BREVIS RADIX-LIKE 1 26 390 IPR044532 -
Phco8g01924 390 Pfam Transcription factor BRX N-terminal domain 45 77 IPR027988 -
Phco8g01924 390 Pfam Transcription factor regulating root and shoot growth via Pin3 334 389 IPR013591 -
Phco8g01924 390 Pfam Transcription factor regulating root and shoot growth via Pin3 156 210 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01924 Phco-Chr8 20364528 20369905 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01924 8 20364528 20369905 Phco8g01924 8 20364528 20369905 ECH
Phco8g01924 8 20364528 20369905 Phco7g02703 7 45996359 46009724 PCT