LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco7g02703	ATGCTCACGTGCATAGCACGTCCCAAGAAACTCGACTCGGCCACCGACGATCCGAGTTCGCGCGGGGCCAAATCGCTAACGTGTCAGCTGAAGGAGATGGCGCTGAAGGCGTCGGGGTCGTACAAGCAGTGCGGTCCGTGCGCGCCATCGCAGAGTCGACTGAGTCGCGGTGGCGAGTCCGATTCGGAGTCGTCGCGGCGGCGGTGGGGGAAGGAGATGGAGGCGCGGCTGAAGGGGATATCGAGCGGCGAGGGGACGCCGAGCTCCAGCGGGAGGAGAACGATGGTGGTGCTGGAAGAGGAGGCGGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCCGGGGTTTTGATCACGTTCGTGTCGCTTCCGCGTGGCGGGAACCATCTCAAACGGATTCGGTTCAGTCGCGATGTATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAATTACGACAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGCCAAGCTTTCCCTCTTCCCACTCCACCAAGGTCTGAAGACGAGAGTTCGAAGCGTGAATCAATAGAAGAGATCCCTGTGACACCTCCACTGAGCAGGGAAAGGCCACCTTGTAATTTATTTCGTGCAGGAGGAGGAGGGGTGGCAATTGGGTACTCATCCTCTGATTCGTTTGATCATCAGTCAATGCAATCCCGGCATTACTATGATCCAAGTGGTGTGAACTCAACCCCGAAGGTGTCCACCATTAGTGCTGCTGCCAAGACAGATATCTCATCAATGGATGCTGATGCTTCTATTAGAAGTAGCTCATCTAGAGAAGAAGCTGATCGCTCTGGTGATCTATCAATCAGTAATGCCAGTGACCTGGACGCTGAATGGGTTGAGCAGGATGAACCTGGGGTTTACATTACCATCAGAGCTCTCCCAGGTGGCAAAAGGGAGCTCAGACGAGTAAGGTTCAGTCGAGAAAAGTTTGGGGAGATGTATGCCAGACTGTGGTGGGAAGAGAACCGTGCCAGAATACATGAACAGTACTTTTTAGAAGAGAAGTCGCTGGCAGTGCAGAAGAAAGTTGTTCGGTTATTTCGCGGAAACAGATTAAACAGCAATGCAACTGTGGGTCCCACCCCGAGTGCGGCACGTGTGGGAAACGCCGCTGATAATCGTTCGTCGATGATTCCTTCTTTCAACGCTTACCTCGTAAGCAACCTTCGATCAAAAGCATCATCTTCCAATCCCAATCCCAAACCCATCGCATAG	1257	0.533	MLTCIARPKKLDSATDDPSSRGAKSLTCQLKEMALKASGSYKQCGPCAPSQSRLSRGGESDSESSRRRWGKEMEARLKGISSGEGTPSSSGRRTMVVLEEEAEPKEWVAQVEPGVLITFVSLPRGGNHLKRIRFSRDVFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPPRSEDESSKRESIEEIPVTPPLSRERPPCNLFRAGGGGVAIGYSSSDSFDHQSMQSRHYYDPSGVNSTPKVSTISAAAKTDISSMDADASIRSSSSREEADRSGDLSISNASDLDAEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMYARLWWEENRARIHEQYFLEEKSLAVQKKVVRLFRGNRLNSNATVGPTPSAARVGNAADNRSSMIPSFNAYLVSNLRSKASSSNPNPKPIA	418

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco7g02703	418	Pfam	Transcription factor BRX N-terminal domain	24	47	IPR027988	-
	Phco7g02703	418	ProSiteProfiles	BRX domain profile.	290	345	IPR013591	-
	Phco7g02703	418	MobiDBLite	consensus disorder prediction	59	78	-	-
	Phco7g02703	418	MobiDBLite	consensus disorder prediction	170	202	-	-
	Phco7g02703	418	Pfam	Transcription factor regulating root and shoot growth via Pin3	105	159	IPR013591	-
	Phco7g02703	418	Pfam	Transcription factor regulating root and shoot growth via Pin3	290	344	IPR013591	-
	Phco7g02703	418	MobiDBLite	consensus disorder prediction	258	282	-	-
	Phco7g02703	418	MobiDBLite	consensus disorder prediction	40	93	-	-
	Phco7g02703	418	MobiDBLite	consensus disorder prediction	1	23	-	-
	Phco7g02703	418	PANTHER	PROTEIN BREVIS RADIX-LIKE 1	1	344	IPR044532	-
	Phco7g02703	418	MobiDBLite	consensus disorder prediction	44	58	-	-
	Phco7g02703	418	ProSiteProfiles	BRX domain profile.	105	160	IPR013591	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco7g02703	Phco-Chr7	45996359	46009724	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco7g02703	7	45996359	46009724	Phco7g02703	7	45996359	46009724	ECH
	Phco8g01924	8	20364528	20369905	Phco7g02703	7	45996359	46009724	PCT