Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01919 ATGTCTAGAGTTGAAGGTGGTAAGAGGAGTGGCGAAGAGGAGAAGAATTTGCTATTAAAAGGTGTTGAAACCGTAGACAAAGCTCTGTGCATAGAGAAAAGCTCTTCCACGAATTCAAAATCTTCCAAATCCCTGTTACTTGATCCCAAATCAAAGGCTAAAGATAGCAAAGAAGATAACTTACGTAAGGATAAGAAGTTCGTATGGAATTGGAAACCATTGAAGGCCCTTTCCCTCTCTCGCAATAAGAAGTTCAATTGTAGTTTTTCTGTCCAAGTCCATGTGATTGAAGGGTTGCCTTTGAGTTTCAATGATTCTTGCCTTTGTGTGTATTGGAAGAGGCGGGATACGCTTTTGGTGACCCCTCCAGCCAAGGTGATTCAAGGTGTGGCTGAGTTTCAAGACATTTTGACACACAGTTGCTGTATCAATGGAAGTAGGAGTGGACCCCAAAACTCAGCCAAATATGAAGCCAAGCATTTTCTGCTCTATGCTTCTGAGGCAGGTGCCCCAGAAGTTGATTTGGGGAAGCACCGAGTGGACCTCACAAGTTTGCTTCCTCTCACTCTGGAAGAGCTTGAAGAGAAGAAAAGGTCAGGGGTATGGACTACAAGTTTTAGATTATCAGGAACCGCAAAGGGAGCAGTAATGAATGTCAGTTTTGGGTATGTCATTGTTGGTGACAATACTAGTGCTACCAGAGACAACCTTTGTGATACTCATAATCTACTCACCCCCAAGAAAAAGGGTATGCCTCTGATGGAACCAGATATAAAACCTAGTCAGGTTGACAGGAGGCTTAGATGTACTTCAGATTTGTCAAACTTTGCCAGTAATTATTATTCATCTCAAAATGTAGATGAGGTGAAAGATCTTCATGAGGTGTTGCCAACATCAACATCAGCTCGAGCCAGCCCAGTATACATCCCATGTAAGGAATTTGTTGAAGAAAGAAGTTGTAGTCCTCTGCACGGCAAACCTGAACTTGAGGGCATTAAAGAAAATATTGATCCAACCAAACCAGTTGTTTGTTCTTCATTTGGCGATGAAAAGGACAAGGCAGAAGAGAATCTAGGTAATGAGGGGAAAACAAGCAGTCTAGTGCATGACAAACCTGAAGTTTTTGTATTTCAAGAAAACCTGGACACAGTTACGCTAAATGATTATCCTTTACCTGATTCTGGAATAGAAAATGTCGAAGAATGTGAAGGTAATGAATTTTCTGTTGTTGATAAGGGCATCGAATTTTCATCAGATGAACATGTTAAACTAGAGGAATCTATTGGAAAAGCTTTTATTGATGTCTACACAGTTGACAGTACTCGGACCCTTGATAATGCTGGTATTCAAGTATCTTTTCAAGACAATGATAATCAGTATTCCCTTGTTGAACTAAGCAATAATTGTAAGGAAAGTGTTGTGGTACATGAATTTTCTAACCTAAAGAATGACTTGCCGACGAAAGAACTTCTACTGCAAGAACTAGAATCAGCTTTAAATAGTGTCTCAGAGTTGGAGACAGCGGCAATGGATTCTCCTATAATCATGGAAGCCAAATCTGAATATAAGTTGAGAAAGACACAAAGCTTGGATGATGTTACAGAATCAGTTGCCAGTGAGTTTTTAAGTATGCTTGGCATAGACCGTAGTCCAAGGGGTTTGAGTTTTGAAGGTGAGACTGAGTCTCCAAGAGAGCTCCTTTTGAGACAATTTGAGAATGAAGTTCGTTCAGAGGGCTTCTCTTTGTTTGATTTTGACATGGGCAGTGATAATGAAGCAGATAGTGGTGATGGTTCTTCTTTTGGATCTGAGCATTGGAAGTTCTCCACGGCTATTAAACCAGCATCCTCAATGCCAGATGTACATAAAGGGCATCTAATTGAGTTTGAGAATGTGAGGAACAAACAAAAGGTCCAGATGCTAGAAGACTTGGAAACAGAAGCCTTAATGCGTGAATGGGGCTTGAGTGAGAAGGCTTTTCAGCATTCTCCTAAAAAAGATTATAATAACGGCTTAGGAAGTCCAATATATTTTCTACCTGAAGAGACTCTACCATTACCTCCTCTAGCAGAGGGGTTAGGTCCTTTTCTTCAGACCGAAGATGGGGGCTTTCTACGGTCAATGAATCCCACACTCTTCAGGAATAGTAGAATTGGTGGAGCATTAATCATGCAGGTTTCCAACCCAATTGTGGTGCCCGCTGAAATGGGTTCTGGGATAATGGAGATTTTGCAGTATTTGGCTTCGGTGGGAATTGAAAAACTTTCCAAGCAGGCAAATAAGTTAATGCCTCTAGAAGATATCACAGGGAAGACAATGCAACAAATATCAAGGGAAGTCTTGGGGGGAACACACAGGCAATTACATTTGCGGCATAATTTGGTAACAGGACAGCATTCTACTTGTGCGCAAAAAGGCTTGACGGGAACACTATATGGTGGACTAGTGTCTAATAAGTTCAGTTCAGATTCAGATTCAGATGGCAACCAGAGAGGCTCAGAGTTTGATTCATTGGATGATCTTGCTCTATTAGCTATGGATAAAATTGAAGCACTTTCACTGGAGGGTTTGAGAATACAATCTGGGATGTCAAATGAGGATGCACCATCAAATATCATTGCACAATCCTATGGGGATATTTCAGCTCTGCAAGGCAAGGGGGTTAGTATTAGGGGCTCCCTTGGCCTAGATGGAGCTGCTGCCATGCAATTGTTGGATATGAAAAACAGCAGCAGTGATGAATATGGTGTTGACGGCATAATGGCCCTATCATTAACTCTAGATGAATGGATGAGGCTGGATTCTGGTGAGATTGATGATGATATAGATAATATCAGTGAGCATACTTCCAAACTTCTTGCTGCGCATCATGCTAATTCTTTTGACTTGATTCGTGGGAAGAGTTCAAAGGGAGAGAGGAAAAGAGGCAGGAAATGTGGTTTGTTGGGAAACAAATTCATAGTAGCTCTAATGGAGCAGCTTCGTGATCCTCTGAGAAACTATGAGCCTGTTGGGACACCAATGCTTGCTCTCATACAAGTCGAGAGAGTGTTCATCCCACCAAAGCAAGAGATTTATAGGCACTTAGGTGAGGCAGGGAACAAGAATGATGATGAGTGTGAAATAGTAGCCAAGGTGGAGATGAAGGCCAACAAAGAAGAGAAAAGTTCTGAAGATGAGGGCATTCCTCAATTCAAAATTATAGAAGTACATGTTGCAGGTCTGCAAAAAAGGAAGTTTTGGGACACTTCGAGACGACGACAACAACAAGAACAATCTGGTTCCCGCTGGTTGATTGCTAATGGAATGGGGAAGAGCTTTAAGAATCCAATTCTGAAGTCAAATGTTGTAACTAAATCTAGTGCTCCAATCACTACCACAAACGTGCAACCGGGAGACTCATTGTGGAGCATATCATCTCGTATTTATGGTACACTAACAAGATGGAATTGGTAG 3456 0.4146 MSRVEGGKRSGEEEKNLLLKGVETVDKALCIEKSSSTNSKSSKSLLLDPKSKAKDSKEDNLRKDKKFVWNWKPLKALSLSRNKKFNCSFSVQVHVIEGLPLSFNDSCLCVYWKRRDTLLVTPPAKVIQGVAEFQDILTHSCCINGSRSGPQNSAKYEAKHFLLYASEAGAPEVDLGKHRVDLTSLLPLTLEELEEKKRSGVWTTSFRLSGTAKGAVMNVSFGYVIVGDNTSATRDNLCDTHNLLTPKKKGMPLMEPDIKPSQVDRRLRCTSDLSNFASNYYSSQNVDEVKDLHEVLPTSTSARASPVYIPCKEFVEERSCSPLHGKPELEGIKENIDPTKPVVCSSFGDEKDKAEENLGNEGKTSSLVHDKPEVFVFQENLDTVTLNDYPLPDSGIENVEECEGNEFSVVDKGIEFSSDEHVKLEESIGKAFIDVYTVDSTRTLDNAGIQVSFQDNDNQYSLVELSNNCKESVVVHEFSNLKNDLPTKELLLQELESALNSVSELETAAMDSPIIMEAKSEYKLRKTQSLDDVTESVASEFLSMLGIDRSPRGLSFEGETESPRELLLRQFENEVRSEGFSLFDFDMGSDNEADSGDGSSFGSEHWKFSTAIKPASSMPDVHKGHLIEFENVRNKQKVQMLEDLETEALMREWGLSEKAFQHSPKKDYNNGLGSPIYFLPEETLPLPPLAEGLGPFLQTEDGGFLRSMNPTLFRNSRIGGALIMQVSNPIVVPAEMGSGIMEILQYLASVGIEKLSKQANKLMPLEDITGKTMQQISREVLGGTHRQLHLRHNLVTGQHSTCAQKGLTGTLYGGLVSNKFSSDSDSDGNQRGSEFDSLDDLALLAMDKIEALSLEGLRIQSGMSNEDAPSNIIAQSYGDISALQGKGVSIRGSLGLDGAAAMQLLDMKNSSSDEYGVDGIMALSLTLDEWMRLDSGEIDDDIDNISEHTSKLLAAHHANSFDLIRGKSSKGERKRGRKCGLLGNKFIVALMEQLRDPLRNYEPVGTPMLALIQVERVFIPPKQEIYRHLGEAGNKNDDECEIVAKVEMKANKEEKSSEDEGIPQFKIIEVHVAGLQKRKFWDTSRRRQQQEQSGSRWLIANGMGKSFKNPILKSNVVTKSSAPITTTNVQPGDSLWSISSRIYGTLTRWNW 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01919 1151 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1150 IPR039614 -
Phco8g01919 1151 ProSiteProfiles C2 NT-type domain profile. 77 225 IPR019448 -
Phco8g01919 1151 Coils Coil 488 508 - -
Phco8g01919 1151 MobiDBLite consensus disorder prediction 34 58 - -
Phco8g01919 1151 CDD LysM 1129 1150 IPR018392 -
Phco8g01919 1151 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 82 227 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01919 Phco-Chr8 20280037 20283595 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01919 8 20280037 20283595 Phco8g01919 8 20280037 20283595 ECH
Phco8g01919 8 20280037 20283595 Phco7g02705 7 46026152 46034075 PCT