Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02705 ATGATTGGGAGTTTCAGTGTTGAACTTGAGAACAAGGGTAGGTGTCTATGGATTGGGTTCGCTGACCTAATATTTTTGCGGTTGCTTTGGTTTCATCTGCAACACTGCCTGAAGAGGATGTTGTCGAGAATGGAGGCTGGGAAGAAGAGTGGTGGGGGTTCTAGTGCCCCGAAGAAGTTGCTGAAGGATGTTGAAACCATTAACAAAGCTTTGTACTTGGATAGAGGGTCTTCAAGGAGTTCAATACCTAGTGTAAATTCTCGATCTAAATTCACTGGGAAATCTCAGTTACCTGATCCCAAATCTAAGTCTAAAGCAAGTGGTAATAATCATAATAATGATGATGATGATGGTGTTCAGAAGGATAAGAAGTCCATTTGGAATTGGAGGCCTCTCAGGGCCCTTTCCCACATCCGAAATAAGAGGTTTAATTGTAGTTTTTATCTGCAAGTTCATTTGATTGAAGGGTTGCCTCCAAGTTTTGATAATGCTAGTATTGCTGTGTACTGGAAAAGGCGTGATGGGGTTCTTGTGACTGGTGCTGCTAAGGTGATTCAGTCTGTGGCTGAATTTGAAGAGAAGTTGACCTACACTTGCTCGGTGTATGGCAGTAGGAGTGGACCTCACCATTCTGCCAAGTATGAAGCAAAGCATTTTTTGCTATATGCTTCGCTTCTGAGTGCGCAGGAGATGGATTTGGGAAAGCACCGGGTGGATCTGACAAGGTTGCTTCCTCTCACTCTGGAGGAGCTTGAGGAGGAGAAGAGCTCGGGGAAGTGGACTACTAGTTTTCGACTATCAGGAGTGGCTAAGGGTTCTGTGATGAATGTCAGTTTTGGCTATACGGTGGTTGGTGATAATGCTAGTGCTACCAGAGATAGCCATAATGCGTCTAACGTATTGACTTCCAGGCAGAATAGTATTGCTCTGATGAAGCAAGATGCTAAACCCCGACAGTTTGATGGAAGCAGCAGGATGAGGCGTACTTCTAGTTTGCAATTCTCACCTCGAGGTTCAGATGAGGTAAAGGAACTTCATGAGGTGTTGCCATCTACTAAGTCTGCTCTAGCCAGCTCAATAGACATCTTATATAAGAAATTTGATGAAGAAAAGGCTAGTTCTCTGCATGGTGAAGCAGAACTTGCTTCATTCACAGAAAATCTTGTGTCAATCAAACCAGATGCATATGCTTCCGTTCTTGGAAAAGAAACATTTGATGAGCATGTGAGTAAGGCTGAAGATAAATGTTCAGTGCATGACGAACCTGGACTCTCTGTGTTTCAAGAAAAGCTGGAGATAATTAAACCAGATGACAATTCTTTACCTGATTCCGCAAATGAAAACCCTGAAGAGTTTCAAGGTAATGATTTTGTTGTTGTTGATAAGGGCATAGAACTATCATCAAATGAACCTGTTATAACAGAGGAATTCATTGTGAAGGCTCCTGAAGATGCTTCTACAGTTATTGGTATATCTGGTATACAAGAACCTTTTGAAGACACTGTTAAATATGATTTTCTGGATGAGGTAAATGATAGTTCTAAGGACCAGGTAGTGGTAGAGGAATTTACTAGCAAAGAGGATGGCTTTGACAGTGATGCTAATGAGCTGCTCCTGCAAGAACTAGAATCTGCTTTAAATAGTGTATCGAATTTGGAGAGAGTGGCACTAGAATCTCCCAAAACAGCAGAATTTAAATCTGAACATAAGATGACAAAGTCACATAGCTTGGATGATGTTACAGAATCAGTTGCCAGTGAGTTTTTAAGCATGTTAGACTGTAGTCCAATGGCCTTGAATTCTGAAAGTGAGCCTGAATCTCCAAGAGAGCTACTTTTAAGACAATTTGAGAAGGAGGCTTTGGATGGGGATTTCTCCTCTTTGTTTGATTTTGAAATGAACCACGATAATGAAGCAGATGGTGGCTATGATGGTTCCACTGCATCTGAGCAGTGGAACTTTTCTGAAGATGTTAAGTCATCATCCTTTTTCCAAGAGCTGCAGGAGGAGCATCTAGCTGAGTCTCAGGATGTAAGTAGCAAACAGAGGGCTCAGATACTAGAAGACATGGAAACAGAAGCCTTGATGCGTCAATGGGGTTTGAATGAGGAGGCTTTTCATCGTTCTCCACCAAAAGATTTTACTGGTTTTGGAAGTCCAATTCCTTTGCCACCCGAAGAGACTCCTATATTGCCTCCTCTTGATGATGGGTTGGGCCCTTTTCTTCAGACAAAAGACGGGGGTTTTCTACGCTCTATGAATCTCTCACTTTTCAAGAATTCTAAAAGTGGTGGGAGTTTAATCATGCAGGTATCCAACCCTGTCGTGGTACCTGCAGAAATGGGTTCTGGGATAATGGAGGTTTTGCAGTGTTTGGCTTCAGTGGGAATTGAAAAGCTCTCGATGCAGGCAAAGGAGTTAATGCCGCTAGAAGATATCACAGGGAAGACAATGCAACAAGTAGCATGGGAAGCTATGCCTGTCTTAGAAGGAGCAGAGAGGCAAAGCCATTTGCAGCATGATCCAATAACAGGGCAAGGCAGTGCTCATCTGCAAAGGGACTTGAAAGGAATGCCGTCTGGACAAAAGTCTGGCAAGTTTAGTTCAAGAACAGTGGCCAACCAACTAGACTCAGAGTTTGTTTCAGTTGAAGACCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTGAGAATCCAATCTGGGATGTCAGAAGAGGAGGCACCTTCAAACATCATTGCACAGTCCATTGGGGATATTTCGGCTCTGCAGGGCAATGGCGTTGATATTAGTGGGTCCCTTGGCCTGGATGGTGCTGCTGGTTTGCAGTTGATGGATGTAAAAGATGGCACTGATGGCGGTGATGGTGTTGATGGAATAATGGGCCTATCATTAACTCTTAATGAATGGATGAGGCTGGATTCAGGTGAGATTGACGATATAGATAATATCAGTGAGCATACTTCCAAACTTCTTGCAGCCCATCATGCCAACTCTTTTGACTTCATTCGTTGGAGTTCAAAGGGAGAGAAGAGACGAGGCAAAAGCAGAAGATGTGGTTTGCTAGGAAACAATTTCACAGTAGCATTAATGGTGCAACTCCGTGACCCTCTGAGAAATTACGAGCCGGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGAGTTCATGCTTCCAAAGCAAAAAATTTACAATAGTGTGTCTTTCATAATGAAAAACAATGACGAGGATGATGATAGGGAAATCCTAGCGAAGGTGGACACGAAGGACACCAAGAAAGAGGAGAAAAGTTCTGACGAGGAAGAGGGCATTCCTCAGTTCAGAATCACAGAAGTACATGTGGCAGGTCTGAAGCCTGAGCCTCAGAAAAAGAAGCTCTGGGGCACTTCAAGCCAGCAACAATCTGGTTCTCGCTGGTTGCTTGCTAATGGAATGGGGAAGAGCAATAATAAGCTTTCATTGATGAAATCAAAGGGTGCATCTAAATCTAGTGCTCCAGTTACCACAAAGGTGCAACCTGGTGACACCTTATGGAGCATATCATCTCGTGTTTTTGGCAATCGAGGGAAGTGGAAGGAGTTGGCAGCAGTAAATCCACATATAAGAAACCCCAATGTCATTATACCAAATGACACCATAAGACTCAGCTGA 3672 0.4316 MIGSFSVELENKGRCLWIGFADLIFLRLLWFHLQHCLKRMLSRMEAGKKSGGGSSAPKKLLKDVETINKALYLDRGSSRSSIPSVNSRSKFTGKSQLPDPKSKSKASGNNHNNDDDDGVQKDKKSIWNWRPLRALSHIRNKRFNCSFYLQVHLIEGLPPSFDNASIAVYWKRRDGVLVTGAAKVIQSVAEFEEKLTYTCSVYGSRSGPHHSAKYEAKHFLLYASLLSAQEMDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLSGVAKGSVMNVSFGYTVVGDNASATRDSHNASNVLTSRQNSIALMKQDAKPRQFDGSSRMRRTSSLQFSPRGSDEVKELHEVLPSTKSALASSIDILYKKFDEEKASSLHGEAELASFTENLVSIKPDAYASVLGKETFDEHVSKAEDKCSVHDEPGLSVFQEKLEIIKPDDNSLPDSANENPEEFQGNDFVVVDKGIELSSNEPVITEEFIVKAPEDASTVIGISGIQEPFEDTVKYDFLDEVNDSSKDQVVVEEFTSKEDGFDSDANELLLQELESALNSVSNLERVALESPKTAEFKSEHKMTKSHSLDDVTESVASEFLSMLDCSPMALNSESEPESPRELLLRQFEKEALDGDFSSLFDFEMNHDNEADGGYDGSTASEQWNFSEDVKSSSFFQELQEEHLAESQDVSSKQRAQILEDMETEALMRQWGLNEEAFHRSPPKDFTGFGSPIPLPPEETPILPPLDDGLGPFLQTKDGGFLRSMNLSLFKNSKSGGSLIMQVSNPVVVPAEMGSGIMEVLQCLASVGIEKLSMQAKELMPLEDITGKTMQQVAWEAMPVLEGAERQSHLQHDPITGQGSAHLQRDLKGMPSGQKSGKFSSRTVANQLDSEFVSVEDLAPLAMDKIEALSMEGLRIQSGMSEEEAPSNIIAQSIGDISALQGNGVDISGSLGLDGAAGLQLMDVKDGTDGGDGVDGIMGLSLTLNEWMRLDSGEIDDIDNISEHTSKLLAAHHANSFDFIRWSSKGEKRRGKSRRCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVEREFMLPKQKIYNSVSFIMKNNDEDDDREILAKVDTKDTKKEEKSSDEEEGIPQFRITEVHVAGLKPEPQKKKLWGTSSQQQSGSRWLLANGMGKSNNKLSLMKSKGASKSSAPVTTKVQPGDTLWSISSRVFGNRGKWKELAAVNPHIRNPNVIIPNDTIRLS 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02705 1223 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 140 285 IPR019448 -
Phco7g02705 1223 CDD LysM 1177 1222 IPR018392 -
Phco7g02705 1223 MobiDBLite consensus disorder prediction 1157 1179 - -
Phco7g02705 1223 MobiDBLite consensus disorder prediction 77 120 - -
Phco7g02705 1223 ProSiteProfiles LysM domain profile. 1174 1222 IPR018392 -
Phco7g02705 1223 ProSiteProfiles C2 NT-type domain profile. 135 283 IPR019448 -
Phco7g02705 1223 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 40 1217 IPR039614 -
Phco7g02705 1223 SMART LysM_2 1175 1223 IPR018392 -
Phco7g02705 1223 Pfam LysM domain 1177 1222 IPR018392 -
Phco7g02705 1223 MobiDBLite consensus disorder prediction 77 107 - -
Phco7g02705 1223 Gene3D LysM domain 1167 1223 IPR036779 -
Phco7g02705 1223 SUPERFAMILY LysM domain 1174 1222 IPR036779 -
Phco7g02705 1223 Coils Coil 535 555 - -
Phco7g02705 1223 MobiDBLite consensus disorder prediction 315 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02705 Phco-Chr7 46026152 46034075 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02705 7 46026152 46034075 Phco7g02705 7 46026152 46034075 ECH
Phco8g01919 8 20280037 20283595 Phco7g02705 7 46026152 46034075 PCT