Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01897 ATGAGCAACGACAAGGACACCTTCAACGTCGCCGATCTCTCCTCTGTTCTCAACGAGGAAAATAGAGCAGAGCTAGTCAATGCTCTTAAGAGCAAGATACAGAGTTTGGCCGGGCAGCACTCCGATATTCTTGAGTCGTTATCACCTAATGTCAGGAAGCGTGTTGAGGTTCTTAGAGAGATCCAGGGCCAACACGATGAATTAGAGGCTAAATTTTTTGAGGAGAGAGCAGCACTCGAGGCCAAATACCAAAAAATGTATCAACCACTGTACACGAAGCGATATGACATAGTAAATGGTGTTACCGAAGTCGAAGAAGCGGCAGTGAAAGAAAAAACACCCGATAGTGGGGAGGATGAAGAGAAGGGAGTGCCTGCGTTTTGGCTTACTGCAATGAAAAACAATGAAGTGTTAGCCGAGGAGATTTCAGAGCGTGATGAAGGTGCTCTCAAGTTTCTCAAAGATATCAAGTGGAGCAGGATAGAAAATCCTAAAGGATTCAAGCTTGAGTTTTTCTTTGATACCAATCCTTATTTTACTAATACTGTCTTGACTAAAACATATCATATGATTGATGAGGATGAACCAATTTTGGAGAAAGCAATTGGGACTGAAATTCAATGGCACTCAGGAAAATGCCTGACACAGAAGATTCTTAAGAAAAAGCCCAAGAAGGGTTCAAAGAATGCTAAACCAATTACCAAAACTGAAAGTTGTGAAAGTTTCTTCAATTTCTTCAATCCACCACAAGTTCCTGAAGATGATGAAGACATTGATGAAGAAGCGGCTGAGGAGCTACAGAATCAGATGGAACAAGACTATGACATTGGGTCAACAATAAGAGACAAGATTATTCCCCATGCTGTGTCCTGGTTTACTGGAGAGGCCATCCAGGGGGATGAGTTTGGAGAATTAGAGGAGGACGAGGACGATGAAGATGTTGAAGAGGACGATGATGAAGAGGAAGATGAAGATGATGACGATGACGAAGATGACGAGGAAGAAAACAAGACTAAAAAGAGGTCATCAGCACCCAAGAAGAGTGGAAGAGCACAGCTTGGTGAGGGTCAGCAGGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTAG 1107 0.4345 MSNDKDTFNVADLSSVLNEENRAELVNALKSKIQSLAGQHSDILESLSPNVRKRVEVLREIQGQHDELEAKFFEERAALEAKYQKMYQPLYTKRYDIVNGVTEVEEAAVKEKTPDSGEDEEKGVPAFWLTAMKNNEVLAEEISERDEGALKFLKDIKWSRIENPKGFKLEFFFDTNPYFTNTVLTKTYHMIDEDEPILEKAIGTEIQWHSGKCLTQKILKKKPKKGSKNAKPITKTESCESFFNFFNPPQVPEDDEDIDEEAAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQGDEFGELEEDEDDEDVEEDDDEEEDEDDDDDEDDEEENKTKKRSSAPKKSGRAQLGEGQQGERPPECKQQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01897 368 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 33 321 IPR002164 GO:0005634|GO:0006334
Phco8g01897 368 Gene3D - 45 104 - -
Phco8g01897 368 MobiDBLite consensus disorder prediction 300 333 - -
Phco8g01897 368 Pfam Nucleosome assembly protein (NAP) 53 295 IPR002164 GO:0005634|GO:0006334
Phco8g01897 368 SUPERFAMILY ARM repeat 302 334 IPR016024 -
Phco8g01897 368 FunFam Nucleosome assembly protein11 119 295 - -
Phco8g01897 368 SUPERFAMILY NAP-like 30 294 IPR037231 -
Phco8g01897 368 MobiDBLite consensus disorder prediction 295 368 - -
Phco8g01897 368 Gene3D Nucleosome assembly protein 119 295 - -
Phco8g01897 368 FunFam Nucleosome assembly protein 1-like 1 45 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01897 Phco-Chr8 20042784 20045500 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01897 8 20042784 20045500 Phco8g01897 8 20042784 20045500 ECH
Phco8g01897 8 20042784 20045500 Phco7g02727 7 46228677 46235586 PCT