Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02727 ATGTTTAGACAGAATGCTTCTATGGTGGAAAATAAGGTTGTTGTACCACTTCATCTGCGTGATCAGTGGGAAATAAGAGTGGGAGAAGAGGATTCGACGGCATCGTCAAACCCTGCTTCATTCCCTCTTTCTAGGGTTTTAGTTCTCTTTCTCTTTTCCCTCTTTTCCTCTTCAACCTTCTTCTCAATGTCCAACAACAACCAAAACATTACCATGACCGATCTCACTTCTGCACTCAACGAAGACAATCGCGCCGATCTAGTCAGTGCTCTCAAGAGTAAGATACAGAGTCTGGCTGGACAGCATTCTGATATTCTGGAGACTTTATCGCCTATCGTCAGGAAGCGTGTTGAATCTCTTAGGGAGATTCAGGGTAAACATGATGAAATAGAGGCAGACTTCTTCAAGGAGAGAGAGGCTCTTGAAGCTAAGTACCAAAAGTTGTATCAGCCGTTGTACACAAAGCGCTATGAAATAGTAAATGGTGTCACTGAAGTGGAAGGGGCAGCAAATGAAACAACCGATGAATCAGAAGAGGATAATGAGAAAGGAGTACCTTCTTTTTGGCTCAATGCAATGAAAAATAATGATGTATTGGCTGAAGAGATTTCAGAGCGTGATGAAGGTGCTCTCAAGTTTCTAAAAGACATCAAGTGGAGCCGGGTAGAAAACCCTAAAGGATTCAAGCTTGAATTCTTCTTTGATACCAATACTTACTTTTCAAACTCTGTCTTGACTAAAACATATCATATGATCGATGAGGATGAACCTATATTGGAGAAAGCAATTGGGACGGAAATTGAATGGTACCCGGGAAAATGCTTGACTCAGAAGGTGTTGAAGAAAAAGCCCAAGAAGGGTTCAAAGAATGCTAAACCAATTACCAAAACTGAAAACTGTGAAAGCTTCTTCAATTTTTTCAAACCACCAGAAGTTCCTGAAGATGATGATGACATTGATGAAGATTTGGCTGAGGAGCTTCAGAATCAGATGGAACAAGATTATGACATTGGGTCAACTATAAGGGACAAAATTATCCCTCATGCTGTATCTTGGTTTACCGGGGAGGCTGTTCAGGGAGATGAGTTTGAAGACCTGGAGGATGATGAGGACGAAGATGATGAGGAGGAGGATGAAGAAGAGGATGAAGATGAAGACGACGATGATGACGAGGAAGAGGAGGAAGACACTAAGACTAAAAAGAAGAAGAGTGAAAGGGCACAGACTGGTGATGGTCAGCAGGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTAG 1275 0.4243 MFRQNASMVENKVVVPLHLRDQWEIRVGEEDSTASSNPASFPLSRVLVLFLFSLFSSSTFFSMSNNNQNITMTDLTSALNEDNRADLVSALKSKIQSLAGQHSDILETLSPIVRKRVESLREIQGKHDEIEADFFKEREALEAKYQKLYQPLYTKRYEIVNGVTEVEGAANETTDESEEDNEKGVPSFWLNAMKNNDVLAEEISERDEGALKFLKDIKWSRVENPKGFKLEFFFDTNTYFSNSVLTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKVLKKKPKKGSKNAKPITKTENCESFFNFFKPPEVPEDDDDIDEDLAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAVQGDEFEDLEDDEDEDDEEEDEEEDEDEDDDDDEEEEEDTKTKKKKSERAQTGDGQQGERPPECKQQ 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02727 424 MobiDBLite consensus disorder prediction 395 410 - -
Phco7g02727 424 Gene3D Nucleosome assembly protein 180 356 - -
Phco7g02727 424 Gene3D - 108 166 - -
Phco7g02727 424 FunFam Nucleosome assembly protein 1-like 1 107 165 - -
Phco7g02727 424 MobiDBLite consensus disorder prediction 355 424 - -
Phco7g02727 424 Coils Coil 363 383 - -
Phco7g02727 424 Pfam Nucleosome assembly protein (NAP) 115 356 IPR002164 GO:0005634|GO:0006334
Phco7g02727 424 FunFam Nucleosome assembly protein11 180 356 - -
Phco7g02727 424 MobiDBLite consensus disorder prediction 360 394 - -
Phco7g02727 424 SUPERFAMILY NAP-like 92 355 IPR037231 -
Phco7g02727 424 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 95 380 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02727 Phco-Chr7 46228677 46235586 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02727 7 46228677 46235586 Phco7g02727 7 46228677 46235586 ECH
Phco8g01897 8 20042784 20045500 Phco7g02727 7 46228677 46235586 PCT