Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01888 ATGGGTAAGGGTTACGGTCCAAGTCAGAAGTTTGGTTCAACTCTTGAGAAGTTTGTTTACACAATGAGGTACATGTGTGATATGACATGCATTAACCAAATTAAGTCCCTCGTCTCTCCCAAAATGGCAAGTTATTTTAGATTTTCGAAAGCTTTGGTAATGCTAGGGTTAACCTTCGTAGTGCTCACACAGGCACAATCACAACCTTGGTCATTACTCCAAGCACCAAAAGACCTAACCCTGAAGCTTATTCGTGATCCTGTGAGCCTTTCAGTAGCCTCAACGGACTTTGGCCACATAGTTCATGACAACCCTTTTGCAATTTTTTCTCCATCGTCCATTAGTGACATCTCTCTGTTGATAAATTTCTCGAATTCTCTCCCCATCCCTTTCACCATAGCTCCTAGAGGGCAAGCACATTCGGTTAACGGACAAGCCATGACAAATGGTGGGGTTGTGGTGAACATGACTGAGTTGAATGGGTTTAGAAACGGGGCTGGGATTGTAGTAGTGTCTGATGGCACTCCATATGCTGATGTGGGTGGAGAACAAATTTGGATTGATGTGTTGCATGCAACACTTGAGCACGGACTCACACCACTCTCTTGGACTGACTACTTGTTCTTATCGGTTGCTGGAACTCTCTCCAATGCTGGGATTAGTGGCCAATCCTTCAGGTTTGGTCCTCAGATTTCCAATGTTCATCAATTGGATGTTGTTACAGGGAAAGGAGACCTAGTGACATGTTCTTCGGAGAACAACTCAGAGTTATTTTATGCCGTCCTAGGAGGACTAGGTCAATTTGGAATTATAACTAGGGCAAGAATAGCTCTTGGACCCGCACCAACTATGGTGAAGTGGCTCCGTTTGCTTTACAACAATTTCTCTGCTTTTTCTGCAGACCAAGAACACTTAATCTCGTTGAATGGAAGAAACGAGACCATTGCTGCTGATTATGTAGAAGGTTTCCTTCTGCTAAATCAGCCACCACTGGATGTTTCCTCTTTTCCAGCACCTGATCAACCTCGTATAACTTCCCTAGTAACACAATACGGCATCATCTACATCATAGAGCTTGTGAAATATTACGACAATAGTACTCAAGAACATGTTGAAGAGGAAGTAAAACTTTTGGTGGAGGGGTTGAAGTTTGTTCCTACGTTTATGTTCGAAAAAGATGTATCATACGAAGAGTTCCTGAACAGAGTTCATTCTGACGAGCTTTTCTTAAGATCACAAGGACTTTGGGATGTCCCTCATCCTTGGATAAACCTCTTTGTTCCAGGATCTCGAATCTCAGATTTCAATGAAGGTGTGTTCAAGGGCATTATTCTGAAGCAAAATATAACTGCAGGAATTGCGATAATCTACCCCATGAATCGATCCAAGTGGAATGATAAGATGTCCGCAGTTACACCTAATGAAGATGTTTTCTATGTTGTGTCACTTCTTCATGCAACTGGGTTTGATAAAGTGGAGGAATTTCAAGCTCAAAACCAACAAATATTAGATTTCTGTGAGAATGCTGGTATTGAGATCAAGCAATATCTTCCTCAAAACAAAACAAGGAAAGAATGGATGAAACAGTTTGGCTCCAAATGGAAAATTTTCCAAGAAAGAAAAACTCAATTTGATCCCAACAGAATATTGTCACCTGGACAGAGGATTTTCAATTAA 1677 0.4144 MGKGYGPSQKFGSTLEKFVYTMRYMCDMTCINQIKSLVSPKMASYFRFSKALVMLGLTFVVLTQAQSQPWSLLQAPKDLTLKLIRDPVSLSVASTDFGHIVHDNPFAIFSPSSISDISLLINFSNSLPIPFTIAPRGQAHSVNGQAMTNGGVVVNMTELNGFRNGAGIVVVSDGTPYADVGGEQIWIDVLHATLEHGLTPLSWTDYLFLSVAGTLSNAGISGQSFRFGPQISNVHQLDVVTGKGDLVTCSSENNSELFYAVLGGLGQFGIITRARIALGPAPTMVKWLRLLYNNFSAFSADQEHLISLNGRNETIAADYVEGFLLLNQPPLDVSSFPAPDQPRITSLVTQYGIIYIIELVKYYDNSTQEHVEEEVKLLVEGLKFVPTFMFEKDVSYEEFLNRVHSDELFLRSQGLWDVPHPWINLFVPGSRISDFNEGVFKGIILKQNITAGIAIIYPMNRSKWNDKMSAVTPNEDVFYVVSLLHATGFDKVEEFQAQNQQILDFCENAGIEIKQYLPQNKTRKEWMKQFGSKWKIFQERKTQFDPNRILSPGQRIFN 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01888 558 Gene3D - 156 283 IPR016169 -
Phco8g01888 558 SUPERFAMILY FAD-linked oxidases, C-terminal domain 282 558 IPR016164 GO:0003824|GO:0050660
Phco8g01888 558 PANTHER GULONOLACTONE OXIDASE 63 558 - -
Phco8g01888 558 Pfam FAD binding domain 107 250 IPR006094 GO:0050660
Phco8g01888 558 Gene3D - 87 557 IPR016167 -
Phco8g01888 558 SUPERFAMILY FAD-binding/transporter-associated domain-like 83 280 IPR036318 GO:0050660
Phco8g01888 558 Gene3D - 284 516 IPR016170 -
Phco8g01888 558 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 282 557 IPR015345 GO:0009690|GO:0019139|GO:0050660
Phco8g01888 558 ProSiteProfiles PCMH-type FAD-binding domain profile. 101 281 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01888 Phco-Chr8 19924541 19929636 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01888 8 19924541 19929636 Phco7g02734 7 46346476 46349350 PCT