Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02734 ATGGTTGTGCTACTGCTATCTTGCAATGTGCTTACACAAGAACAACCACGACTATGGTCAGCATTCCAAGTATCCAAAGAACTAGCCTCAAAGCTTAGTCGTAACCCTCAAACCCTTCCACTAGCCTCAACCGATTATGGCAACATAGTTCACAAAACCCCTGTTGCTGTGTTTGAGCCTTCTTCAGTTGGTGATATCTTGGCCTTGATAAGTTTCTCAAACTCTCTTCCCACCCCTTTCACCATAGCCCCTAGAGGCAAAGCACACTCAGTTCATGGACAAGCCATGAATAACCTCAGTGGGGTGGTGTTGAACATGACTAACCTCCATTGGCCTGAGATTGTGGTGGCTTGTGATGGCAAAAGTCCATTGGGGTGTTATGCCGATGCAGGTGGTGGACAATTGTGGTATGATGTGTTGCATGCAACCCTTCCACATGGACTCACCCCTCTTTCTTGGACTGATTATATGTATGCTACTGTTGGAGGCACTCTCTCTAATGCTGGAATGGGTGGCATGTCCTTTCTATTCGGACCTCAGATCTCTAATGTTCTTGAGTTGGATGTTGTTACAGGGAAAGGAGACCTTGTGAGTTGCTCTGGGGAGAAGGAGTCAGAGTTATTTTACGGTGTTCTTGGAGGATTAGGTCAATTTGGTGTAATAACAAGAGCAAGAATACCTCTAGGACCTGCACCTAACAGGGTAAAATGGCTCCGACTACTTTACAACAACTTCACTGCATTTTCTAGAGACCAAGAACATTTAATCTCTTTCAGTGAAAGTAACGACAAAACTACAGCAGATTATGTAGAAGGCATGCTTCTACTGAATCAGCCACCACTTGATCTTTTCTTTTTTCCACCTTCTGATCATCAAAGGATAACATCACTGGTAACCCAAAATGGCATCATCTACCTCTTAGAGCTTGCCAAATACTATGACAACAACTCTGAAGCACTCATCAAGAAGGAAGTTACAGATTTGGTAAAAGGGTTAAGTTTTTTACCTACATTTGTGTTCGAAAAAGATGTGTCTTACGAGGAGTTTGTGAACAGAGTTTATCCATTGGAGATGATTCTTAGGTCAGAAGGACTTTGGGAAGTTCCTCATCCTTGGTTGAATCTCTGGGTTCCAAGATCTCGAATCTCGGATTTTAACGAAGGAGTTTTCAGAGACATTATTCTTAAGCAAAATATTACTGGTGGAGGATTTTTAGTCTACCCAACGAACCGAAACAAGTGGGATGATAGGATGTCACCAGTAACACCAGACGAAGATGTTTTCTATGTTGTAGATTTTTTGCGTACTGCTACGAGGTTTGATGTGGTGGAGAAATTTCAGGCACAGAACAAAGAGATTCTACAGTTTTGTAGGAAAGCTGGTATTAAGATCAGGGAATACCTTACTGGTAACAAAACACAACAACAATGGGTGGAACACTTCGGTCCAAAATGGAAACTTTTTGCAGATAGAAAAGCTCAGTTTGATCCCAAGAGAATACTGTCACCAGGACAAGGGATTTTCCATCAAACAATGTGCTAG 1542 0.4228 MVVLLLSCNVLTQEQPRLWSAFQVSKELASKLSRNPQTLPLASTDYGNIVHKTPVAVFEPSSVGDILALISFSNSLPTPFTIAPRGKAHSVHGQAMNNLSGVVLNMTNLHWPEIVVACDGKSPLGCYADAGGGQLWYDVLHATLPHGLTPLSWTDYMYATVGGTLSNAGMGGMSFLFGPQISNVLELDVVTGKGDLVSCSGEKESELFYGVLGGLGQFGVITRARIPLGPAPNRVKWLRLLYNNFTAFSRDQEHLISFSESNDKTTADYVEGMLLLNQPPLDLFFFPPSDHQRITSLVTQNGIIYLLELAKYYDNNSEALIKKEVTDLVKGLSFLPTFVFEKDVSYEEFVNRVYPLEMILRSEGLWEVPHPWLNLWVPRSRISDFNEGVFRDIILKQNITGGGFLVYPTNRNKWDDRMSPVTPDEDVFYVVDFLRTATRFDVVEKFQAQNKEILQFCRKAGIKIREYLTGNKTQQQWVEHFGPKWKLFADRKAQFDPKRILSPGQGIFHQTMC 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02734 513 Gene3D - 234 467 IPR016170 -
Phco7g02734 513 SUPERFAMILY FAD-linked oxidases, C-terminal domain 232 508 IPR016164 GO:0003824|GO:0050660
Phco7g02734 513 ProSiteProfiles PCMH-type FAD-binding domain profile. 50 231 IPR016166 GO:0071949
Phco7g02734 513 Pfam FAD binding domain 55 200 IPR006094 GO:0050660
Phco7g02734 513 Gene3D - 106 233 IPR016169 -
Phco7g02734 513 PANTHER GULONOLACTONE OXIDASE 4 508 - -
Phco7g02734 513 SUPERFAMILY FAD-binding/transporter-associated domain-like 32 230 IPR036318 GO:0050660
Phco7g02734 513 Gene3D - 37 508 IPR016167 -
Phco7g02734 513 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 232 508 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02734 Phco-Chr7 46346476 46349350 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02734 7 46346476 46349350 Phco7g02734 7 46346476 46349350 ECH
Phco8g01888 8 19924541 19929636 Phco7g02734 7 46346476 46349350 PCT