Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01836 ATGGGAACGTTCCGGAGCTTGAGAAAGGCCTACGGTGCTCTCAAAGACTCTACCAAGGTTGGCCTAGCCAAGGTCAATAGCGAATACAAGGATTTGGATATTGCTATTGTGAAGGCTACCAGTCACGTAGAATATCCTCCAAAAGAACGTCATGTTAGAAAGATATTCTATGCAACTTCAGCACACCAACCACGGGCAGATGTGGCTTACTGCATACACACACTTGCTAGGAGGCTTGCAAAGACCCGGAATTGGATAGTTGCAGTAAAGACATTGATTGTTATTCATAGAATATTGAGAGAGGGTGATCCTACTTTCAAAGAAGACCTCATAAACTATGCGCGCAGGGGACGTTTTCTTCAAATATCCAATTTCAAAGATGACTCAAGTCCTCAAGCTTGGGACTGTTCTGCATGGGTTCGAACCTATGCACTATTCTTAGAAGAAAGGCTTGAATGTTTTAGAATCCTTAAATATGACATCGAGTCTGAGCGTTTAACAAAACCATCGCCCATTATAACCAAGGGACACAGCAGAACACGGTCGTTGACTAGTGAAGGGCTATTGGAGCAGCTGCCTGCACTGCAGCAACTTCTATACCGCCTAGTTGGTTGTCAGCCTGAAGGTTTGGCTCTCGGCAATTATCTAATACAGTATGCACTGGCATTGATATTGAAAGAGAGCTTCAAAATATATTGTGCCCTGAATGATGGAATTATAAATCTTGTGGATGTGTTCTTTGATATGCCAAAATATGATGCAATCAAGGCGTTACATATTTATAAAAGAGCTAGCCAACAGGCTGATAATCTTGCCGAATTCTATGAATACTGCAAGAGATTGGACCTTGCTAGGAATTTTCAATTTCCAATCTTGAGACAGCCACCTGCTTCTTTTCTTGCCACGATGGAAGAATACGTTAGAGAAGCACCCTTCAATGCATCTAATAGACTGGAATATCACGAAAATGATCAATCACCTAAAAAGGAAGCAGAACCCAAAGAACCTGAAGAGGCTCAAGCAAATGAAAAACCAGATGAAGAAGACAAGGAGGAAGAACTGGTTGATAAAGATGAAGCAGAGCCTAAGAAGGAGGAAATGGAACTTCCTCCTTTGATATCAACTGATTCTACTGATGATTTGCTGGGTCTAAACGAAATAAATCCAAAAGCCCAGGAACTAGAAGAAAGCAATGCTTTGGCGCTGGCAATTATTCCACCCGGGGGAAATAACTCGAGCAATCTTGCTTTGGCTAACATAAATGGAACTTCTGGTTGGGAACTTGCACTGGTTACAACAACAAGTACCCATACAAGCCAAGCGCCAAATCGCAAAATGGCTGGTGGGTTTGACAATCTATTACTAGACAGTTTGTATGAAGATGAAAATGCTAGGAGACAACTTCAACTCCGAAATGCAGGCTATGGATATGGGGAAATGGATACACATAATCCATTCAATCATCATAATCAGCAAGATCCATTTGCAATGTCCAACAACATACCACCTCCAGCCAATGTGCAAATGGCATTCATGCCTCAGCAACAGCAACAACATAACATGATGATGGTCCCTTACCAGTACCCACAGACTCAATATCATCAACAAATGCCAGTCATGGGTTCTTCTAATCCATTTGATGATCCCTTACCCGTGCCCACCTATGCTTATAATTCCGTGAATCATCAAGGAAACTACCATTTAATGTAG 1710 0.4193 MGTFRSLRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATSHVEYPPKERHVRKIFYATSAHQPRADVAYCIHTLARRLAKTRNWIVAVKTLIVIHRILREGDPTFKEDLINYARRGRFLQISNFKDDSSPQAWDCSAWVRTYALFLEERLECFRILKYDIESERLTKPSPIITKGHSRTRSLTSEGLLEQLPALQQLLYRLVGCQPEGLALGNYLIQYALALILKESFKIYCALNDGIINLVDVFFDMPKYDAIKALHIYKRASQQADNLAEFYEYCKRLDLARNFQFPILRQPPASFLATMEEYVREAPFNASNRLEYHENDQSPKKEAEPKEPEEAQANEKPDEEDKEEELVDKDEAEPKKEEMELPPLISTDSTDDLLGLNEINPKAQELEESNALALAIIPPGGNNSSNLALANINGTSGWELALVTTTSTHTSQAPNRKMAGGFDNLLLDSLYEDENARRQLQLRNAGYGYGEMDTHNPFNHHNQQDPFAMSNNIPPPANVQMAFMPQQQQQHNMMMVPYQYPQTQYHQQMPVMGSSNPFDDPLPVPTYAYNSVNHQGNYHLM 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01836 569 Gene3D ANTH domain 174 322 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Phco8g01836 569 PANTHER CLATHRIN ASSEMBLY PROTEIN 7 520 IPR045192 GO:0048268|GO:0072583
Phco8g01836 569 FunFam Clathrin assembly protein AP180 6 161 - -
Phco8g01836 569 SMART enth_2 30 161 IPR013809 -
Phco8g01836 569 MobiDBLite consensus disorder prediction 321 343 - -
Phco8g01836 569 MobiDBLite consensus disorder prediction 356 370 - -
Phco8g01836 569 MobiDBLite consensus disorder prediction 314 383 - -
Phco8g01836 569 SUPERFAMILY ENTH/VHS domain 30 162 IPR008942 -
Phco8g01836 569 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Phco8g01836 569 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Phco8g01836 569 CDD ANTH_N 32 154 - -
Phco8g01836 569 FunFam Putative clathrin assembly protein 173 321 - -
Phco8g01836 569 Gene3D - 6 161 IPR008942 -
Phco8g01836 569 SUPERFAMILY GAT-like domain 178 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01836 Phco-Chr8 19298497 19303994 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01836 8 19298497 19303994 Phco8g01836 8 19298497 19303994 ECH
Phco8g01836 8 19298497 19303994 Phco7g02778 7 46857518 46862866 PCT