Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01539 ATGGGTGTGGAGAATGCCTCGAAGTCCATTTCCACCTCACAATGCGATGACCAACTTAGCAACAGCAGAATCAACACACTTGTGCGTTTGAATGTCTACGATCTCACCCCTGTCAATAATTACGTCTACTGGTTTGGATTTGGCATATTTCATTCTGGCATTGAAGTGCATGGTAAGGAGTATGGATTTGGAGCCCATGATTTCCCAGCTAGTGGAGTTTTTGAAGTGGAGCCAAGGAAGTGCCCTGGATTCGTATATAGATGTTCCATCACTTTGGGTCAAACCAATATGAGTGCTTCTGAGTTTCGTACATTTATTGAAAACATGGCTTCCGAGTATCATGGGGATACCTATCACCTAATAACTAAGAACTGCAATCATTTTACAGAGGATCTCTGCAATAGATTGACTGGGAAACAAATCCCAGGTTGGGTGAATCGGCTTGCTAAGCTAGGTGCTTTATGCAGTTGTCTACTTCCTGAAAGTCTTCAAGTAACAAGTGTTAAACAGCTACCTGAATACCATGAATGTTCAGAAGATGAATTTGTTGAATCTCTTTCACCTGCCACACCCCGCGAGTCAACAGAAATAGATGAGGAGCAAGAAAAACACCTTCTTTCATCATCAACTGTAACTGAGGATGTTACTTTTGTTAGAGAAAGCCAAGCAAAATAA 675 0.4163 MGVENASKSISTSQCDDQLSNSRINTLVRLNVYDLTPVNNYVYWFGFGIFHSGIEVHGKEYGFGAHDFPASGVFEVEPRKCPGFVYRCSITLGQTNMSASEFRTFIENMASEYHGDTYHLITKNCNHFTEDLCNRLTGKQIPGWVNRLAKLGALCSCLLPESLQVTSVKQLPEYHECSEDEFVESLSPATPRESTEIDEEQEKHLLSSSTVTEDVTFVRESQAK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01539 224 Pfam PPPDE putative peptidase domain 28 160 IPR008580 GO:0008233
Phco8g01539 224 Gene3D PPPDE domains 22 178 IPR042266 -
Phco8g01539 224 PANTHER DESUMOYLATING ISOPEPTIDASE 26 204 IPR008580 GO:0008233
Phco8g01539 224 MobiDBLite consensus disorder prediction 193 207 - -
Phco8g01539 224 SMART DUF862_2a 26 164 IPR008580 GO:0008233
Phco8g01539 224 MobiDBLite consensus disorder prediction 182 209 - -
Phco8g01539 224 ProSiteProfiles PPPDE domain profile. 26 163 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01539 Phco-Chr8 15876107 15880136 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01539 8 15876107 15880136 Phco8g01539 8 15876107 15880136 ECH
Phco8g01539 8 15876107 15880136 Phco7g02371 7 41478253 41481033 PCT