Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02371 ATGGGGACGACGAAGAGCAGCTCCAATTCTACCTCAAAATCTGATAATAATAATAATAATAGCAATAATGTCAATGGCGACAAGGACAAAAACAACGCCAGAGTGGTGTTGAATGTCTACGACCTCACCCCTCTCAACAATTATTTGTATTGGTTCGGCTTTGGAATCTTTCACTCAGGCATTGAAGTACACGGTAAAGAGTATGGATTTGGAGCTCATGACTTTCCAGCAAGTGGAGTATTTGAAGTAGAGCCAAAGAAGTGCCCTGGATTTATATACAGATGTTCTGTCACTTTAGGTCAAGTAAATATGCATCCTTCTGAGTTTCGAACATTCATTGAGACCATAGCTAATGAGTATCATGGAGATACCTACCACCTTATATCTAAGAACTGCAATCATTTTACGGATGATATGTCACATAGATTGAATGGAAAACGAATCCCAGGTTGGGTGAATCGTCTTGCTAGGTTAGGTTCACTTTGCAGTTGCCTACTTCCTGATTGTGTTGAAGTAACTACTGTTAAACAACTACCGGAATACCATGACTGTTCAGAAGATGAAATTACTGAGTCTCTTTCGTCTGCCTCACCATGTGGATCTCAAGCAACATCAGGAATAGACGATGACCAAGAAAAGCACCTTTTGTCACCTTTCGCCAGTAAAACAGATAATGTTTCGTTTGTTAAAGAGGCACCATTAAAATGA 708 0.3983 MGTTKSSSNSTSKSDNNNNNSNNVNGDKDKNNARVVLNVYDLTPLNNYLYWFGFGIFHSGIEVHGKEYGFGAHDFPASGVFEVEPKKCPGFIYRCSVTLGQVNMHPSEFRTFIETIANEYHGDTYHLISKNCNHFTDDMSHRLNGKRIPGWVNRLARLGSLCSCLLPDCVEVTTVKQLPEYHDCSEDEITESLSSASPCGSQATSGIDDDQEKHLLSPFASKTDNVSFVKEAPLK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02371 235 SMART DUF862_2a 33 175 IPR008580 GO:0008233
Phco7g02371 235 PANTHER DESUMOYLATING ISOPEPTIDASE 31 211 IPR008580 GO:0008233
Phco7g02371 235 MobiDBLite consensus disorder prediction 1 29 - -
Phco7g02371 235 Gene3D PPPDE domains 28 183 IPR042266 -
Phco7g02371 235 MobiDBLite consensus disorder prediction 193 212 - -
Phco7g02371 235 ProSiteProfiles PPPDE domain profile. 33 170 IPR008580 GO:0008233
Phco7g02371 235 Pfam PPPDE putative peptidase domain 34 168 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02371 Phco-Chr7 41478253 41481033 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02371 7 41478253 41481033 Phco7g02371 7 41478253 41481033 ECH
Phco8g01539 8 15876107 15880136 Phco7g02371 7 41478253 41481033 PCT