Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01326 ATGTTGCACGGTTCATCTAGTACTGTTTCAAAGGACATGGCAAACTCAAGTGAAGAGGAGAACCAACAGGCTTGTGATACTTTACGCTCGATCGATGTCTCAAACAATAAGGGCTCGCAGGAAGGAGATGAAAAAGAAGCTACACCACAAAAGCTGTCCAAACTTTCAGATGAGCCCAAAGAGGAGGGTATGAAGACGGTTATGGCTTTTCTTATCCTTCCCCAGGACCAAGAGAATGAGCAAATCCATGAAGCTGAGATTTCTGACAAAACCCTACGTATTGGCAAACTCTACAAGGATCTCTCTATCAATGTTCTCCAAAAAGTGTCAAGGTCTGATTATGGCTTAATTGCTGCATTGAACAGTAGTTTTCGATCTCTGATTCGGAGTGGAGAGCTGTATAAGGTGAGGCGGGAAATGGGTATTGTAGAGCATTGGATTTACTTTTCTTGCAATCTCGGTCAATGGGAAGCATATGATCCAAACCGCGGGCGTTGGATGAAGTTGCCAAAAATGCCTCGTGATGACTGCTTTATGTATTCGGATAAGGAGTCGTTGGGTGTTGGTACTGATATTCTTGTTTTTGGAAAGGCGATAACGGCTCCAGTGGTTTATGGATATAGCCTTTTGACCAACACCTGGTCATCTGCTGTAGAAATGAACATTCCCAGATTCTTATTTGCATCTGCAAGCCTTGGAGGAATTGCCATACTGGCTGGTGGTGTTGATCCACATGGCGAGGTCTTGAGCGTAGCTGAGCTTTATAACTCAGAAACCAGAAAGTGGGAGACTCTTCCAAACATGCATACAAAAAGGAGGATGTCTGCTGGTGTATTCATGGATGGGAAATTTTATGTGATTGGTGGAATTGCAGAAGACAACATAACAGAAATAACAAGCGGTGAGGAGTACGATTTGGAGACCAAAACATGGCGTGAAATACCCGAGATGTTTCCTCCGCGAGGTGCAGAAGCCTATATGGACGCTCCTCCTTTGGTTGCAGTTGTTAATAATGTATTGTATGCTGCAGATTTTAAGGAGCACAAAGTAAAGAGATATGTGAAAGAGACTAACAAATGGGTAACCATTGGAAGTCTTCCTGAGAAAACATCCTCTACGGGTGGATGGGGAATAGGATTTCGGGCATGTGGAAATCGGATCATGGTTATTGGTGGGCTTAGGTCTGAGAGTGGAGGTATGACTGAAATTAATTCTTGGATCCCAGCTGAGGGTCCAGTGCAGTGGGACCTGCTTGCAAAAAGGAGGATAGGGAGCTTTGTGATTAATTGCGCAGTGATGGGATGCTGA 1308 0.4427 MLHGSSSTVSKDMANSSEEENQQACDTLRSIDVSNNKGSQEGDEKEATPQKLSKLSDEPKEEGMKTVMAFLILPQDQENEQIHEAEISDKTLRIGKLYKDLSINVLQKVSRSDYGLIAALNSSFRSLIRSGELYKVRREMGIVEHWIYFSCNLGQWEAYDPNRGRWMKLPKMPRDDCFMYSDKESLGVGTDILVFGKAITAPVVYGYSLLTNTWSSAVEMNIPRFLFASASLGGIAILAGGVDPHGEVLSVAELYNSETRKWETLPNMHTKRRMSAGVFMDGKFYVIGGIAEDNITEITSGEEYDLETKTWREIPEMFPPRGAEAYMDAPPLVAVVNNVLYAADFKEHKVKRYVKETNKWVTIGSLPEKTSSTGGWGIGFRACGNRIMVIGGLRSESGGMTEINSWIPAEGPVQWDLLAKRRIGSFVINCAVMGC 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01326 435 MobiDBLite consensus disorder prediction 38 61 - -
Phco8g01326 435 MobiDBLite consensus disorder prediction 1 37 - -
Phco8g01326 435 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 85 435 - -
Phco8g01326 435 SMART kelc_smart 235 282 IPR006652 GO:0005515
Phco8g01326 435 SMART kelc_smart 283 328 IPR006652 GO:0005515
Phco8g01326 435 Gene3D - 134 431 IPR015915 GO:0005515
Phco8g01326 435 FunFam F-box/kelch-repeat protein SKIP11 139 420 - -
Phco8g01326 435 MobiDBLite consensus disorder prediction 1 61 - -
Phco8g01326 435 SUPERFAMILY Kelch motif 151 426 IPR015915 GO:0005515
Phco8g01326 435 Pfam Kelch motif 272 317 IPR006652 GO:0005515
Phco8g01326 435 Pfam Kelch motif 223 268 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01326 Phco-Chr8 13825549 13826856 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01326 8 13825549 13826856 Phco7g02271 7 39989139 39991838 ECH
Phco8g01326 8 13825549 13826856 Phco8g01326 8 13825549 13826856 ECH