Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02271 ATGTTGTTGGAAGGAGAAAAAGGAAGCAAAAAAGAAGGGAGTAACAGAGAGGAATTAGAAGACTGTGGTTTCAACACGAGAGAAAGAGAGACGCCACTACTCCTCTGCGTGGCTCGCTCGCATAACCGTGGGCCAGATAAACCCGTTTGGAATTCGTCTCTCTTTTATCTAAATTCATTGATTCTTTCCGTCGACATGTTGGAGGGTCCAACCTTTCTTGTTTCGAGGGACTTACCGAGCTCATGTGAGCAAGAGACCAGGTGGATTTACAATTCCTTCTGTGTGATGCAGCTCTCAAACAACAAGCGTCGACTGGAGCTAGATGAAGAAGCTGTGCTGAGAAAGTCATGCAAGCTTTCAGATGCTCCTGAGGATGGGGAAGGGGAAACAAAGAAGAACATTCAAGATCTTTCCCTATCCGTTAACCAAACAAATGAACAAAATCATGCAAGTGACCAGTCAGACTCAAGTTCTCTTATCTACCAACTTGGTCGGGACATCTCAATTAATTGTCTCCTACGATGCTCCAGGTCTGACTATGGTTCGATTGCCTCATTGAACCAAAGTTTTCGATCTCTCATCCGGACTGGAGAGCTTTATAGGCTGAGGCGGCAGATGGGTATCATAGAGCATTGGGTTTACTTCTCTTGTAATCTTCCTGAATGGGAGGCATTTGATCCAAACACTGGTAGATGGATGCGCTTGCCTAGAATGCCTTCTAATGAATGCTTTATCTGTTCAGATAAAGAGTCATTGGCTGTTGGTACAGAGCTTCTTGTTTTTGGAAAGGAGATAATGTCTCCTGTCATATACAGATATAGTATTTTGATGAACTCATGGTCATCTGGTATGGAAATGAATGTTCCTAGATGCTTATTTGGTTCTGCCAGCCTTGGAGAAGTTGCCATATTAGCAGGTGGTTGTGATCCTCGTGGCAATATTTTGAGCTCTGCAGAGCTTTATAACTCAGAAACTGGAACGTGGGAGCTTCTACCAAACATGAATAAAGCTAGGAAAATGTGTTCTGGTGTATTTATATATGGGAAATTTTATGTCATTGGCGGTATTGGAGTAGGTAACTCACGGCAGTTAACATGTGGTGAAGAGTTTGATCTGCAGACGAGAAAGTGGAGAGAAATACCCAACATGTTCCCTGGGCGAAATGGAGGATCTGAGGTGACTGAGGTATCGGCTGCTGCTGAGGCACCTCCGTTGGTTGCAGTTGTAAATAATGTATTGTATGCTGCAGATTATGCCCTACAAGAGGTAAGGAGATATGATAAAGACAATAATTCATGGGTCACTATTGGAAGATTACCTGACCGAATAGTCTCAATGAATGGCTGGGGATTAGCCTTTCGCGCATGTGGAAATCGTCTAATTGTTATTGGTGGGCCAAGAGCTTTAGATGGAAGGGTAATTGAGATCAATGCATGTGTCCCAGGTGAAGGTGTGCCGGAGTGGAACCTGCTTGCTAGTCGGCAGTCAGGAAGCTTTGTGTATAACTGTGCAGTGATGGGATGCTGA 1527 0.4407 MLLEGEKGSKKEGSNREELEDCGFNTRERETPLLLCVARSHNRGPDKPVWNSSLFYLNSLILSVDMLEGPTFLVSRDLPSSCEQETRWIYNSFCVMQLSNNKRRLELDEEAVLRKSCKLSDAPEDGEGETKKNIQDLSLSVNQTNEQNHASDQSDSSSLIYQLGRDISINCLLRCSRSDYGSIASLNQSFRSLIRTGELYRLRRQMGIIEHWVYFSCNLPEWEAFDPNTGRWMRLPRMPSNECFICSDKESLAVGTELLVFGKEIMSPVIYRYSILMNSWSSGMEMNVPRCLFGSASLGEVAILAGGCDPRGNILSSAELYNSETGTWELLPNMNKARKMCSGVFIYGKFYVIGGIGVGNSRQLTCGEEFDLQTRKWREIPNMFPGRNGGSEVTEVSAAAEAPPLVAVVNNVLYAADYALQEVRRYDKDNNSWVTIGRLPDRIVSMNGWGLAFRACGNRLIVIGGPRALDGRVIEINACVPGEGVPEWNLLASRQSGSFVYNCAVMGC 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02271 508 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 149 508 - -
Phco7g02271 508 FunFam F-box/kelch-repeat protein SKIP11 205 493 - -
Phco7g02271 508 Pfam Kelch motif 337 383 IPR006652 GO:0005515
Phco7g02271 508 Pfam Kelch motif 289 335 IPR006652 GO:0005515
Phco7g02271 508 SUPERFAMILY Kelch motif 217 504 IPR015915 GO:0005515
Phco7g02271 508 MobiDBLite consensus disorder prediction 1 22 - -
Phco7g02271 508 SMART kelc_smart 301 348 IPR006652 GO:0005515
Phco7g02271 508 SMART kelc_smart 349 398 IPR006652 GO:0005515
Phco7g02271 508 Gene3D - 202 480 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02271 Phco-Chr7 39989139 39991838 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01326 8 13825549 13826856 Phco7g02271 7 39989139 39991838 ECH
Phco7g02271 7 39989139 39991838 Phco7g02271 7 39989139 39991838 ECH